| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0239 |
|---|
| Symbol | |
|---|
| ID | 4971861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 225030 |
|---|
| End bp | 226163 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640454444 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_001131522 |
|---|
| Protein GI | 145220844 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4833] Predicted glycosyl hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGA TGTGGGCCAA CCGCGCCGCC AGCGCCGAAG CCGCCATCAC CACCCGGCAC
CTGCGTCGGG TGTGGGGACT GCCCGGCACG CAGCTCGGGG TGGTCGCCTG GCCCGCGGCG
ACCGGCCACC GCCGGTTCGG CACGTGGCAC TACTGGTGGC AGGCACATCT GCTCGACAAC
CTCGTCGACG CCCAGCTGCG GGACCCTGCG CCCGAGCGCC TCACCCGGAT CAACCGACAG
ATCCGGGGTC AGCGGATCCG CAACATCGGC AAGTGGACCA ACAGCTACTA CGACGACATG
GCCTGGCTGG CGCTGGCACT CGAACGCGCG CAGCGGCTCA CCGGCGTCGG CCGGCCCAAG
GCGCTGGACA CGCTGGCCGA GCAGTTCCTC ACGGCGTGGG TGCCCGAGGA CGGCGGCGGA
ATCCCGTGGC GCAAGCAGGA CCAGTTCTTC AACGCGCCCG CCAACGGGCC CGCGGCGATC
TTCCTGGCCC GGCACCTGGC CGCGCAGGGC GAGAGCCTGC GCCGGGCCCA GCAGATGGCC
GACTGGATCG ACGAGACGCT GCTCGACCCG CAGACCCATC TGATCTTCGA CGGCATCAAG
GGCGGCTCGC TGGTCCGCGC GCAGTACACC TACTGCCAGG GTGTGGTGCT GGGCGTCGAG
ACCGAGCTCG CCGCGCGCAC GTCCGACTCC CGCCACGCCG AACGGGTGCA CCGGCTGGTG
GCCGCCGTCG CCGAACACAT GGCGCCGGGC GGCGTCATCA ACGGCGCCGG CGGCGGTGAC
GGCGGGCTGT TCAACGGCAT CCTCGCGCGC TACCTGGCGC TGGTCGCGAC CGCGCTGCCC
GGCACCTCGC CGGCCGACGA GCAGGCCCGC CGGACCGCGA CGGAGCTGGT GCTCGCCTCG
GGCCGGGCGG CCTGGGACAA CCGCCAGACC GGCAAGGACA CCGAGGATCT CCCCCTGTTC
GGCGCGTTCT GGGACCGGCC CGCGCAGGTG CCCACCGCGG GGACGGCGGA CGCCCGCAGC
GTCGACGGCG CGGTCAACTC CTCGGAGATC CCGGAGCGGG ACCTGTCGGT CCAGTTGGCG
GGATGGATGC TCATGGAGGC CGCCTGCGTT GTGACCGCAG GTGACAGTGA CTGA
|
|---|
| Protein sequence | MDQMWANRAA SAEAAITTRH LRRVWGLPGT QLGVVAWPAA TGHRRFGTWH YWWQAHLLDN
LVDAQLRDPA PERLTRINRQ IRGQRIRNIG KWTNSYYDDM AWLALALERA QRLTGVGRPK
ALDTLAEQFL TAWVPEDGGG IPWRKQDQFF NAPANGPAAI FLARHLAAQG ESLRRAQQMA
DWIDETLLDP QTHLIFDGIK GGSLVRAQYT YCQGVVLGVE TELAARTSDS RHAERVHRLV
AAVAEHMAPG GVINGAGGGD GGLFNGILAR YLALVATALP GTSPADEQAR RTATELVLAS
GRAAWDNRQT GKDTEDLPLF GAFWDRPAQV PTAGTADARS VDGAVNSSEI PERDLSVQLA
GWMLMEAACV VTAGDSD
|
|---|
| |