| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0186 |
|---|
| Symbol | |
|---|
| ID | 4971808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 169479 |
|---|
| End bp | 170711 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640454391 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001131469 |
|---|
| Protein GI | 145220791 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.291821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCACT CCGCCGAGGA CAACGGCATT CGACGTCGGC CCAAGGACCG AAAAGCGCAG
ATCGCGCGCG CATCGGCGGA GGCGTTCAGT GAACTCGGTT ACCACGGCGT GAGCATGGAG
ATGATCGCGT CGCGCGTGGG GATCTCGGCC GCGGCGCTCT ACCGCCACTA CGCCGGCAAG
TACGAGCTCT TCCGCGACGC CGTGCTCAAC CTCGGCCAGC AGCTCGTCGA CGGCACCGCG
GGCATCGACG GCGACGACCC CGAGGTGGTC CTCGACCGGC TGGTGTCCGC GCTGATCGAC
ATCGCCCTGG CCAATCGAAG CTCGGGCGGC CTGTACCGGT GGGAGCGTCG ATACCTGCGC
GGGGACGACC AGGCCGAACT GCTGCAGCAG CTGCGGACGG TGCACCACCG CCTGCAGACC
CCCGTGTCGA TCCTGCGTCC GGAGCTGACC GCCCGGCAGC GCTCCACGTT GTCGACCGCG
GTGCTCTCGA TCGTCGGAAG CATCGTCGAC CACCGCGCGA AACTGCCTGC GGCACAGATA
CACCGGGTGC TGACGCAGGT CGCGCGGGCG ATCCTGTCCA CCGAGCTACC CGACGCCGCA
CCACCGGCGA CACCCGCACC GGCCGCCGAA CGCATCCGGT CCGCCGCGGA ATCGTCCAAG
TACGAAGCAC TTCTGGCCGA ATCGATGCGC CTGTTCAACC TCAACGGGTA CCGCGACACC
AGCATGGAGG AGATCGCGTC GGCGGTCGGG ATGCCGGCAT CGGGCATCTA CAAGTACTTC
TCGGGCAAGA ACGACATCCT GGCGGCCATC TTCCGCCGTG CCTCCGACCG GGTGTCGGCG
GAGACGGCCG AGATCGTCTC GACAGTGCCC GATCCGCAGG AGGCGCTGGC CGCGGTGATC
GACGCGTACG TGACGCGGGC GTTCGGCCAA CCCGAGATGG AGAGCCTGTA CTACAGCGAG
CGTCTCAACA TGTCACCGTC GGACCAGCGC ATCGTGCGGG ACCTGCAGCG ATCGACCGTG
GAATCGTGGG TCGAACTGGT GGCCGCGGTG CGGCCGGACT GGACCCCCGG GGAGGCCCGC
TTCGCGGTGC ACGCGGCGAT GGCGCTGGTC ATCGATGTCG GACGCCTGGT GCACTACGCC
GCGTCCGACG AGGCCCGTGA CACCGTGGAA GGGCTCGTGG ACGCGGCGCT GCGGGGTAGC
TACCGGTTAC GGGCGACGTT GCCCAGCATG TAG
|
|---|
| Protein sequence | MAHSAEDNGI RRRPKDRKAQ IARASAEAFS ELGYHGVSME MIASRVGISA AALYRHYAGK
YELFRDAVLN LGQQLVDGTA GIDGDDPEVV LDRLVSALID IALANRSSGG LYRWERRYLR
GDDQAELLQQ LRTVHHRLQT PVSILRPELT ARQRSTLSTA VLSIVGSIVD HRAKLPAAQI
HRVLTQVARA ILSTELPDAA PPATPAPAAE RIRSAAESSK YEALLAESMR LFNLNGYRDT
SMEEIASAVG MPASGIYKYF SGKNDILAAI FRRASDRVSA ETAEIVSTVP DPQEALAAVI
DAYVTRAFGQ PEMESLYYSE RLNMSPSDQR IVRDLQRSTV ESWVELVAAV RPDWTPGEAR
FAVHAAMALV IDVGRLVHYA ASDEARDTVE GLVDAALRGS YRLRATLPSM
|
|---|
| |