| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0172 |
|---|
| Symbol | |
|---|
| ID | 4971794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 158784 |
|---|
| End bp | 159494 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640454377 |
|---|
| Product | superoxide dismutase, copper/zinc binding |
|---|
| Protein accession | YP_001131455 |
|---|
| Protein GI | 145220777 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2032] Cu/Zn superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.509734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGGT CCGTCGCTGC CGCCACGTTG TTCGCAGTGC CCGCACTCGC GCTGAGTGCG
TGCTCCCCTC CCGGTGAAGT GCCGTCGGAT TCGCCCGGCA CCACACCGTC GGTGTGGACC
GGATCCCCGT CGCCGTCCGC GGAAGCGGGC GAGCACGGAG CCGGACACGG CGGCGGATCG
GGCCAGGCCT CCGGGGAGAC CCTGACCGCC GAGCTCAATC TCGCCGACGG CACCACGGTC
GCCAACGCCG AGATCGTGTT CTCCGACGGA TACGCGACCG TCACGGTCGA AACCACCGGC
GAGGGCGATC TGACGCCGGG ATTCCACGGC ATGCACATCC ACCAGGTTGG CAAGTGCGAG
CCCAACTCCG TGGCGCCCAC GGGCGGTGCA CCCGGCAACT TCAATTCCGC CGGCGGCCAC
CTTCAGGTCG GGGGCAACAC CGGCCATCCG GCCAGTGGCG ATCTGACGTC GCTGCAGGTG
CGCGAGGACG GTTCGGCCAA GGTGGTGACG ACGACCGACG CGTTCACCGC CGAGGATCTC
ACCGGCGACG CCGGCACCGC GATCATCATC CATGAGAAGG CCGACAACTT CGCCAACATC
CCGCCGGAGC GCTACCAGCA GGTCGACGGT GCGCCGCCAC CGGATCAGAC CACCCTGGCG
ACCGGCGACG CCGGAGCACG GGTGGCCTGC GGTGTCATCA CCGGTTCCTG A
|
|---|
| Protein sequence | MLRSVAAATL FAVPALALSA CSPPGEVPSD SPGTTPSVWT GSPSPSAEAG EHGAGHGGGS
GQASGETLTA ELNLADGTTV ANAEIVFSDG YATVTVETTG EGDLTPGFHG MHIHQVGKCE
PNSVAPTGGA PGNFNSAGGH LQVGGNTGHP ASGDLTSLQV REDGSAKVVT TTDAFTAEDL
TGDAGTAIII HEKADNFANI PPERYQQVDG APPPDQTTLA TGDAGARVAC GVITGS
|
|---|
| |