Gene Mflv_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0112 
Symbol 
ID4971734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp101190 
End bp102275 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content69% 
IMG OID640454317 
Productdiguanylate cyclase 
Protein accessionYP_001131395 
Protein GI145220717 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0231042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGACG GAACTGTCAG GACCCTGCTG CGGCAGTGGT GGAATCAGCG TGACGACTAC 
CAGTGGCGGA TCGACTTCCT GCGCACCCGC GGTCTGTTAC CGGTGCTGCG CTACATCATC
GCCGGCATCG GCGGTTCGCT GGGCGTGCTG TCGGTGTACA ACGCGTTCGT GCCGCCGGGC
GCCGACGGTG TGCTGATCCG CACCGGGTGG GCGATCCTGG CCGTGGGTTC GCTGGGGTGG
GCGGCGCGCT GGGCGCTGGG GTCGTGGCCG ACGGTGCGCG AGTCGGCGGC GCTGGTGGTG
TTCGTCGACG TGATGATGAC CGTCTCCGCG CTGCTGTTCG GCGACCCGAC CCTGGCGATG
TCGGGTATCC CGATCCTGCT GTGCGCGGGC GGATACGTGG TGTTCTTTCA CGGCCCGCGA
CTGCATCTCG TGCACATCGC CTGGTGCACC GCGTCCGTGG TGGGCATCGC GATCTGGCTC
GCGGTGTCGG ATCCGGTGTT CGGGCCGCAG CTCGCGGTGT CGCGGGCGAT CATCGCGCTC
GCGGTCACGG TGTGCGTGCT GCCGGCGTTG CAGTTCGGGT TCTGGCTGCT GCAGGACAGC
TCGATGCAGT CGCTGACCGA CCCCCTGACC GAGCTGACCA ACCGCCGCGG TCTGGCGGTG
TCGGTGAAGC GGCTCAACAC CGATGCGCGG GCGGACGCGA CGTTGTGTGC GCTGCTGATC
GACGTCGACA GGTTCAAGAG CGTCAACGAC ACGTTCGGCC ACGCCGTCGG CGACGACGTG
CTGATCCGGA CGGCGAGACG GATCCGCGCC AGCGTGCCCG AGGACGCGGT CGTGGTCCGT
TGGGGCGGTG AGGAATTCCT GGTGGTGGAC CGGATCCCCG GCAATCAGGC GGAGACGGTC
GCCGAACGGA TCCGTGCCGC CGTCGCCGAA CCCGCCGAGC CGACGGTCAC CGTCAGCATC
GGGTTGGCGA CGTGCGAGCG GGCCGACATC GATCTGATCG ACGTGATCTC CGCCGCCGAC
GCGGCGATGT ATGAGGCCAA GGCCGACGGC GGCAACAAAG TCGTCATCAC CGCCGAAGCG
GCCTGA
 
Protein sequence
MVDGTVRTLL RQWWNQRDDY QWRIDFLRTR GLLPVLRYII AGIGGSLGVL SVYNAFVPPG 
ADGVLIRTGW AILAVGSLGW AARWALGSWP TVRESAALVV FVDVMMTVSA LLFGDPTLAM
SGIPILLCAG GYVVFFHGPR LHLVHIAWCT ASVVGIAIWL AVSDPVFGPQ LAVSRAIIAL
AVTVCVLPAL QFGFWLLQDS SMQSLTDPLT ELTNRRGLAV SVKRLNTDAR ADATLCALLI
DVDRFKSVND TFGHAVGDDV LIRTARRIRA SVPEDAVVVR WGGEEFLVVD RIPGNQAETV
AERIRAAVAE PAEPTVTVSI GLATCERADI DLIDVISAAD AAMYEAKADG GNKVVITAEA
A