Gene Mflv_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0110 
Symbol 
ID4971732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp99623 
End bp100162 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content67% 
IMG OID640454315 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001131393 
Protein GI145220715 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.819214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0623628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAG CCCGCATCCC TCCCGGCGGC TTCAAGGAGC TCGGCCCGCT CAACTGGGTC 
ATCGCCAAGG CCGGCGCCCG CGGCATCCGC AGGCCGCGCT TCAGCCTGAT GAACGTGCTC
GGTCAGCACC GGCTGCTGTT CCTGGCGTGG CTGCCGCTGT CGGGATTTCT GCTCTACGCG
GGGAAGCTGT CCCGTCGCGA CGCCGAGGTC GTCATTTTGC GGGTCGGGCA TCTGAGGGGC
AGCGAGTATG AGCTGCAGCA GCACCGCAGG CTTGCCCGGT CGCGGGGGCT GGACAAGGAG
ACGCAGGCGC GGATCTTCGC CGGGCCCGAC GCCGAGGGCC TGACCGATCG CGAACGGGTG
CTCATCACCG CGACCGACGA GTTCGTCGTC ACGCGCGGGA TCTCGCCGGA GACGTGGCAG
ATGCTCGCAG CGCACTTCAC GAAACCGCAG TTGATCGAAT TCTGTCTGCT CGCAGCGCAA
TACGACGGAT TGGCCGCGAC GATCTCGACG CTGCAGGTGC CCCTGGACTT CCCGGACTGA
 
Protein sequence
MSTARIPPGG FKELGPLNWV IAKAGARGIR RPRFSLMNVL GQHRLLFLAW LPLSGFLLYA 
GKLSRRDAEV VILRVGHLRG SEYELQQHRR LARSRGLDKE TQARIFAGPD AEGLTDRERV
LITATDEFVV TRGISPETWQ MLAAHFTKPQ LIEFCLLAAQ YDGLAATIST LQVPLDFPD