Gene Dred_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3256 
Symbol 
ID4957578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3539363 
End bp3540400 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content42% 
IMG OID640182442 
Productalcohol dehydrogenase 
Protein accessionYP_001114581 
Protein GI134301085 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCAT TTTTATTGGA GCAGGCAAAT AATTTGGTGC TTAAAACAAT AGAAATACCC 
CGCTGCAAAG CAGGGGAAGT ACTGGTAAAG GTTGCTGCCT GTGGTATTTG CAGAACAGAT
ATGAAATCAT ACCGTCTAGG CCATCGAGAT TTGCATTTAC CAAGAATTTT GGGGCATGAA
ATAGCCGGAA CAGTTGTAGA AATTGGAGCA GGGGTCACAG AAGTACATTG TGGGGAAAGA
GTTCAGGTTT CTCCTGGTTT GCCCTGCGGT GTATGCCCAA ATTGTCTTAC AGGATTAAAT
CATCTTTGCC CAAATATTGA GATAATGGGC TTTCACTATG ACGGCGGCTT TGCTGAATAC
GTGCTGATTC CTTCCAAAGG AGTCAAGGCA AAGGTGCTTA ACAAACTACC GGATCACTTT
CCTATAGAAC TTGCTGCTTT GACAGAGCCT TTGGCATGCT GTATTAACAT TCAGGAGTCT
ATGGACATTG GCTCAGGAGA TACTATTATT ATTTTTGGAG CCGGGCCAGT GGGGATTTTG
AATGCAAAAC TGGCCAAGCT GCGCGGTGCA AAAAATATTG CAATTTTTGA TGTTAATAAA
AAAAGACTCC ACCAGGCTGC CGGCTTTGCA TTTTGCCATT TGTTTAACCC CTTGGAGCAA
GATCCTGTCA AAGTAGTCCG TGAGCTTACC GATGGAACTG GAGCAGAGGC CGTTATACCT
TGCTGTCCAG ATATTGCAGC CTTCCGGCAG GGATTGTCTA TTCTTCGTAA AAGGGGAAAA
TTTGGCTTTT TCAGTGGTCT TGTAGGGGAG CATGCCGTTT CTGTCGGTGA ATTGAATAAT
TTTCACTACA AGGAAATCCG ACTTTTTGGA GCCTATGGGT GTTCTTCGGA ACACAATAAA
AAAGCATTGT TATTATTATC TTCCGGGATG CTGGAGGTGG ATAATCTCAT TACAAAAATT
ATTCCGTTAG AAGATATAAA AGAGGGACTT AGAATGGTGG AGAAACTGGC AGAACTTAAA
ATTGTTGTTA AATGTTAA
 
Protein sequence
MKAFLLEQAN NLVLKTIEIP RCKAGEVLVK VAACGICRTD MKSYRLGHRD LHLPRILGHE 
IAGTVVEIGA GVTEVHCGER VQVSPGLPCG VCPNCLTGLN HLCPNIEIMG FHYDGGFAEY
VLIPSKGVKA KVLNKLPDHF PIELAALTEP LACCINIQES MDIGSGDTII IFGAGPVGIL
NAKLAKLRGA KNIAIFDVNK KRLHQAAGFA FCHLFNPLEQ DPVKVVRELT DGTGAEAVIP
CCPDIAAFRQ GLSILRKRGK FGFFSGLVGE HAVSVGELNN FHYKEIRLFG AYGCSSEHNK
KALLLLSSGM LEVDNLITKI IPLEDIKEGL RMVEKLAELK IVVKC