| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3217 |
|---|
| Symbol | |
|---|
| ID | 4957423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3498733 |
|---|
| End bp | 3499926 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640182405 |
|---|
| Product | Ste24 endopeptidase |
|---|
| Protein accession | YP_001114544 |
|---|
| Protein GI | 134301048 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATAG TATTGGGTTT TTCTTTACTT TATCTATGGT TTATCCTGTT TCCTGGTAAG
GTAGCACCAG AAGCCCTACA TTATTTTTCA GCAGAGCAGA TAAGTCAGGG CAGAGACCAC
AGTCGCAGCC AACAACTATT GTTTTTAATC GGCGTACTGA CGGAAATACT TCTAATAGTA
TGGTTTATAT GGAGCGGCAA AGCGGCCGGT TTTAGTGGTT GGTTGCAACG GGCAAATGGT
GGAAATTATT ATCGTAGCAG CCTCCTGTTT TTTCTAGCTC TATGGGTGGT ACTAAGGTTA
ATTCATTTAC CCCTATCTTA TTTTGGCAGC TTTTATTTAC AAAGGAAGTG GGGTTTTTCT
ACCCAGACCC TAGGCTCCTG GTGGCTGGAT TACTTAAAGG GAGCAGGCCT GGACCTAATT
TTTTCGGCTT TCGGTGTTTT GCTATTCTTT TGGATTCTGA AGCATTGGCC GCGCACTTGG
TGGCTGGTGG GGGCATCCTT GTTCTCAATT TGGTTGGTGG TACAAAATTT TATCTGGCCA
GTGGTGGTTT CTCCTCTTTT TAATCGGTTT GAGCCCGCCA AGGACCCTGC TATCCTCAGT
ATGGTCAATG AACTTGCCAG TAAGGCAGAT ATCCCTGTGG ATGAGGTATT GGTGATGGAT
GCCAGTCGAC GAACCACCCG GGCCAATGCT TACTTTGCCG GACTGGCTGG GACCAAGCAA
ATTGTCCTCT ATGACACCCT GCTCAAGAAT TATCCTCCTG ACCAAGTGAA GGCGGTGATC
GCCCATGAAA TGGCACACTG GCGTCAGGGA CATATTATCA AGGGTTTAAC CCTTGGGATT
ATCGGTAATT TTCTATTGTG GGGGCTGTTA TTTATCTTTA TTAGATCAGT TTTGCCACCG
TCGCGATACC ATCCTCCCTA TACCTGGGCC CTTACAATAC TGTTTTTTTT GACGGTCTCT
TTTGCCACAA GCCCTTTGCA AAATACCATA TCCAGAAGCA TGGAAAAGGA AGCAGATCAG
GTTTCGATAC AGTTGACCGG GGATGTTGCC GCTGCCATTG GTCTGCAGAT AAATCTGGTT
AGTAAAAATT CCTCGGATGT ATCTCCGCCA GCCTTTATTG AATGGTTTAG CTATTCGCAC
CCAGCGGTAT TAAATCGTAT TCACCTCTTG CAGCAGACAA ACATAAATCC CTAG
|
|---|
| Protein sequence | MVIVLGFSLL YLWFILFPGK VAPEALHYFS AEQISQGRDH SRSQQLLFLI GVLTEILLIV
WFIWSGKAAG FSGWLQRANG GNYYRSSLLF FLALWVVLRL IHLPLSYFGS FYLQRKWGFS
TQTLGSWWLD YLKGAGLDLI FSAFGVLLFF WILKHWPRTW WLVGASLFSI WLVVQNFIWP
VVVSPLFNRF EPAKDPAILS MVNELASKAD IPVDEVLVMD ASRRTTRANA YFAGLAGTKQ
IVLYDTLLKN YPPDQVKAVI AHEMAHWRQG HIIKGLTLGI IGNFLLWGLL FIFIRSVLPP
SRYHPPYTWA LTILFFLTVS FATSPLQNTI SRSMEKEADQ VSIQLTGDVA AAIGLQINLV
SKNSSDVSPP AFIEWFSYSH PAVLNRIHLL QQTNINP
|
|---|
| |