Gene Dred_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3203 
Symbol 
ID4957345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3483925 
End bp3484752 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content47% 
IMG OID640182391 
ProductABC transporter related 
Protein accessionYP_001114530 
Protein GI134301034 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.565389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGACC ACGGGCTTTT TGTTAAGGCC GTCAGTAAAA GTTTTCATCA AAATAATCAG 
CCGGTTGTCA TGGCCTTGGA CCGTGTTTCT CTGGCGGTGG CGGCTGGAGA ATTTGTCAGC
ATCCTTGGCC CGAGTGGTTG CGGAAAAAGT ACCTTGTTGG ATATGGTGGC AGGCTTGTCT
AACCCCGATG AGGGAGATAT ATTGTTGGGA AAGCAGTCCA TTGTTGGGAA ACGGGGTTAT
GTCAGCTATA TGCCCCAGAG TGATTTGCTG TTTCCCTGGA GAACGGTCCT TGATAACGTG
ATAATTCCCT TACAATTACA AAGGATCGGT ATCGCAGAGG CTCGCAAAGA AGCCTTGGAC
TTACTACCGG TTTTTGGCTT AGAGAAGTTC GCCCACAGTT ACCCGGATAT GCTTTCGGGC
GGTATGAGGC AGCGGGCGGC TTTATTAAGG ACGTATCTAT GCAAAAGGGA CCTGCTGCTG
CTGGACGAGC CCTTTGGTAA ATTAGATGCC CTAACAAAAA TTCAAATGCA GCAATGGCTT
TTGGATATTT GGGAGCAATT TAAGCCTTCA GTGTTGTTTG TTACCCATGA TATAGATGAA
GCCATTCTTC TTTCGGACCG CATTTACCTA CTTTCACCTA GGCCGGGCAG GTTACAGGCA
GAAATAATGG TGCAGTTACC CAGACCCCGT AATCCGCGCA TAACAACAAA CAGTGCCTTT
GCTCGAATAA AAGAAAAGGT CTACCGATAT TTGGAGAATG GGCTTTTCAA CTGGGAGGAG
AACCGTCTTC ATGACACAAA ACAGAACGTT AATATTTTCC GGGGGTAA
 
Protein sequence
MLDHGLFVKA VSKSFHQNNQ PVVMALDRVS LAVAAGEFVS ILGPSGCGKS TLLDMVAGLS 
NPDEGDILLG KQSIVGKRGY VSYMPQSDLL FPWRTVLDNV IIPLQLQRIG IAEARKEALD
LLPVFGLEKF AHSYPDMLSG GMRQRAALLR TYLCKRDLLL LDEPFGKLDA LTKIQMQQWL
LDIWEQFKPS VLFVTHDIDE AILLSDRIYL LSPRPGRLQA EIMVQLPRPR NPRITTNSAF
ARIKEKVYRY LENGLFNWEE NRLHDTKQNV NIFRG