| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3174 |
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| Symbol | rho |
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| ID | 4957233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3453766 |
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| End bp | 3455118 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640182362 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001114501 |
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| Protein GI | 134301005 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000371975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTGAAA ATGATAGACC TGTCATGACA CAGGCTCAAC TGGAAGCAAA GACCATGCAG
GAATTGTATG GTATTGCCCG TGAATTAGAG ATTCCAGGTT ATTATAAATT TCGCAAAAAA
GAAATTATCT TTGAGATATC GAAATTACAA TCGAAGCAAA GCGGTGTTTC CTATGCCGGA
GGGGTACTGG AAATCCTCCC TGACGGATAT GGCTTTTTAA GACCATCAAC CTATGTACCT
AGCAACGACG ATATTTATGT ATCTAACTCC CAGATACGAC GATTTGATCT AAGAACAGGG
GATATGGTCT ATGGCCAGGT AAGGAAGCCA AAGGATAACG AGCGGTACTA CGGTCTGCTA
AGAGTAGAGC AGGTTAATGG TGCAAGACCC GAACTTGCGG CGGAGCGTAT GCACTTTGCC
GGACTTACAC CCCTTTACCC CCAGGATCGC ATCCGATTAC AAACCACCCC TGATAAGATT
TCAACTCGCA TCATAGACCT CATTTCACCC TTGGGAAAAG GACAGAGAGG CTTGATTGTG
GCTCCCCCAA AGGCAGGTAA AACCATTTTA ATTAAAGAAA TTGCCAATAG TATTACGGCT
AATCACCCTG AGATTGAATT GTTTATTCTA CTAATCGATG AGAGGCCTGA GGAAGTAACG
GATATTGAAC GATCCGTTAA AGCGGAAGTA GTTAGTTCCA CCTTTGATGA ACCACCGGAA
AACCATGTAA AGGCCTCGGA TATGGTTTTG GAGCGGGCTA AACGGCTGGT TGAGAGCGGT
CGTGATGTAG TGATATTGTT GGATAGCATC ACTAGGCTGG CCAGGGCCCA TAACCTTGTC
ATTCCCCCCA GTGGACGTAC CCTTTCAGGC GGTGTGGATC CCGCTGCATT GCATAAACCC
AAACGGTTCT TTGGTGCGGC CCGTAATATG GAAGAAGGCG GTAGCCTGAC CATCTTAGCC
ACTGCACTAA TTGAAACCGG CAGTCGTATG GATGATGTAA TCTTTGAAGA GTTTAAAGGA
ACCGGCAATA TGGAACTGAT TTTAGACCGC AAATTAGCCG ATCGCAGGTT GTTTCCGGCC
ATTGATATAC AACGTTCCGG CACCAGGCGG GAAGATTTGC TTTTATCCAA AGAAGAGTTG
GATTATGTCT GGAGCCTTCG CAAGGTCATT GCCGGTATGA GTTCCATTGA GGCACTGGAA
AGTTTACTGG ATCGTTTGAA AAATACCCGG GCCAATGATG AGATACTGCA TGATTTTAAG
CCCAAGACAA GGGTACAACC CCTAAACCCT AATTTAGATG TGTCACAGCC GCCGGGACAA
AAACGTCCCT ATAGAAGGAA AATACAGGAA TAG
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| Protein sequence | MAENDRPVMT QAQLEAKTMQ ELYGIARELE IPGYYKFRKK EIIFEISKLQ SKQSGVSYAG
GVLEILPDGY GFLRPSTYVP SNDDIYVSNS QIRRFDLRTG DMVYGQVRKP KDNERYYGLL
RVEQVNGARP ELAAERMHFA GLTPLYPQDR IRLQTTPDKI STRIIDLISP LGKGQRGLIV
APPKAGKTIL IKEIANSITA NHPEIELFIL LIDERPEEVT DIERSVKAEV VSSTFDEPPE
NHVKASDMVL ERAKRLVESG RDVVILLDSI TRLARAHNLV IPPSGRTLSG GVDPAALHKP
KRFFGAARNM EEGGSLTILA TALIETGSRM DDVIFEEFKG TGNMELILDR KLADRRLFPA
IDIQRSGTRR EDLLLSKEEL DYVWSLRKVI AGMSSIEALE SLLDRLKNTR ANDEILHDFK
PKTRVQPLNP NLDVSQPPGQ KRPYRRKIQE
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