Gene Dred_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3104 
Symbol 
ID4956962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3377081 
End bp3378757 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content50% 
IMG OID640182292 
Producthypothetical protein 
Protein accessionYP_001114431 
Protein GI134300935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000761845 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAAAGG TTTTGTTAAT TATATTGATC CTTTTGTTAC CCGTTTTAGG GTATGCCGCC 
TTTGGATATA ATCAGACTTT GCGGCAGGAT ATTGTCATTT TGGGCGGGGG ATTTGATGGT
TGTGCTGCGG CCCGCAGCGC TGCTGCTGCT GCACCGGATA AAAGGATTTT GTTGGTGGTG
AATGAACCGG TAGAATCATT AGGCAGTATC GGCACAGTGG GTGGACAAAA TTTTACCGAT
ATCCGGCTCT GGCAAGGCAA ATTGGTAACC CTGGGGTCCT TTGGCCGGTG GTACAGTAAA
GCCGGTCAGT TCTACAATAC CCAGCACATG TCTCGCATTA TTCAGGAAGA CCTGGCTCGT
TTTCCCAATT TAACCATCTT ATATGGCTAC GACCTGTCAG ACATAAAAGT TAAGGAAGCT
ATCATTAATG AAATTACGTT ACGGCAGATT GATCGAAATG CTCAGGGCAC TGTGGTGTGG
GGAGATAAAA CCAAAAGGGT AGCTGGCAAA GTGTTTATTG ATGCATCGGT GGACGGGCGC
TTAACCCGAT TGTCTGGCAA TGCACTAAGT ACAGGGCGCA GTGATTGGCC TGAACAGTAC
CTTCCCGAGG ATGAAAGAAG AATAATGGCT CGACAGCAGG CTGCCACGTT GATGTTTCAA
GTGAGCGGTG TAAAAACTCC GACAAAACCA GCAAGGATTC AAGATTGGGA ATTTGTCCAG
GATAAACAGG GGAGTTGGGG GCTGGCCGGG GGTAAGGAAG CCTTTATGAG CAACCCCACT
GTGGTGGCCT TTAATGAACA ATATGGCCCC CGGGGCTTTG CCCTGAAACC TATTAATGCT
GCAACCAACG GCAAAGACAG TGATGTCTGG TGGGTCAATT GCCTGTTGGT CTTTAACGTG
GATGCCCGAG CCCATGCAAG GGATAAAGAA ACAAAACACT ACCCGGCTGA TGCTTTAGCT
AAACACATCA ACACTGATGA TGCCTGGATT GAGGCCCGGA ATTTCTTAAA AGAGCCAGAC
TTTCTGCAGG CCTTGCGGCA GTTTAAGGTA CAGGACCCTG CCACCGGGGA ATGGTACGGT
TTTGGTGATG CTGAATTAGT TCTGGACAAA GACAAGCAAC CGGTGGTGGG ACCGGTCCTG
TATATTCGAG AATCGGTGCA TAGTCCCCTC TCGGATAAGA CTAGTTCAGG TGCAGAAAAC
AGTAACTTTG CCATTACAAC CCAGGAAGCC CAACGGGCCG GAGCCAAAGA AGCTGGGGCC
GATCAAAGTA ACTACCAACA TCGAATCGGC CTGGGGTATT ACATGATGGA TATTAATGCT
TTTATAGCCG AAGATCTAAA GGCAGCCGGC ACCTATGACT GGCCCGTGAC CAAACACCTG
CGGCCAGACT GGTTGGCAGC CGGCGGGGAA CCAACCAACC CGGTATACTT ACCCCTGGAG
GCACTCTACC CGAACAAGAC AAAGAACCTG CTGATGCCCG GCTATGCCGC CGGCATTTCC
TCCTTTGCCT GGGCAGAACT GCGGGTATTG CCCAATCTGG CAGTACTGGG AGACGCCGCG
GGGGTGGCTG CGGTACGGTC TCTAGCAGTT GAAAAATACC CTAAAGAGTT CAATCAAGAG
GATATCCGGT GGATTCAGAA GAAACTCCAA CAATTCGGAA CAAAGTTGGA CAAATAA
 
Protein sequence
MRKVLLIILI LLLPVLGYAA FGYNQTLRQD IVILGGGFDG CAAARSAAAA APDKRILLVV 
NEPVESLGSI GTVGGQNFTD IRLWQGKLVT LGSFGRWYSK AGQFYNTQHM SRIIQEDLAR
FPNLTILYGY DLSDIKVKEA IINEITLRQI DRNAQGTVVW GDKTKRVAGK VFIDASVDGR
LTRLSGNALS TGRSDWPEQY LPEDERRIMA RQQAATLMFQ VSGVKTPTKP ARIQDWEFVQ
DKQGSWGLAG GKEAFMSNPT VVAFNEQYGP RGFALKPINA ATNGKDSDVW WVNCLLVFNV
DARAHARDKE TKHYPADALA KHINTDDAWI EARNFLKEPD FLQALRQFKV QDPATGEWYG
FGDAELVLDK DKQPVVGPVL YIRESVHSPL SDKTSSGAEN SNFAITTQEA QRAGAKEAGA
DQSNYQHRIG LGYYMMDINA FIAEDLKAAG TYDWPVTKHL RPDWLAAGGE PTNPVYLPLE
ALYPNKTKNL LMPGYAAGIS SFAWAELRVL PNLAVLGDAA GVAAVRSLAV EKYPKEFNQE
DIRWIQKKLQ QFGTKLDK