Gene Dred_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3087 
Symbol 
ID4956897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3352353 
End bp3352814 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content48% 
IMG OID640182275 
Producthypothetical protein 
Protein accessionYP_001114414 
Protein GI134300918 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTCAG TGATGGGTTA CATGGTTATT TTAGTACTGG CCTGCTACGG GGTTTACTAC 
CTGGTTCAGG ACCTGTTACG GTTCTTCATT TATGAACCAG GTCCGCCGGT GAGTTTACTG
GTGGTTCTCC AAGATCGGGC TCCGGATGTG GAGTATCTGA TTCGAAAAAT GGATAACTGG
CGGAAACAGC AATGGGTAGA ATTGGAGCTT GTGGTAGTGG ATGATGGATC CAAAGATGAT
ACCACAGAGA TCCTAGGCAA GCTGCAACAA AAATACTCCT TTCGATTAAT CACCCTGGAA
AAAGAACAGC CTGCAGGGGA AGCAAGGGGC GAGCAGGCCT TGCAAACGGG TTTGCTGTAT
TGCCACAATG CTCTGGTATG GTTAGTTGAT TTAAGAAAGC TTCCCCAGGG TCTGCAGGCT
GACAAGGTTT TTCGTGTATT TTTATGCCAG GGCTGGAGGT AA
 
Protein sequence
MWSVMGYMVI LVLACYGVYY LVQDLLRFFI YEPGPPVSLL VVLQDRAPDV EYLIRKMDNW 
RKQQWVELEL VVVDDGSKDD TTEILGKLQQ KYSFRLITLE KEQPAGEARG EQALQTGLLY
CHNALVWLVD LRKLPQGLQA DKVFRVFLCQ GWR