| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3081 |
|---|
| Symbol | |
|---|
| ID | 4956855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3348441 |
|---|
| End bp | 3349154 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640182269 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_001114408 |
|---|
| Protein GI | 134300912 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000295242 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTTT TGTTGGAGGC ACTGCTCAAT TTACTCTTCC CCCTTCCACC GGGTTGTCAA
CTTTGCGGCC GTACAGGGGA CTGGGATATT TGCCCCACCT GTTCCCATTG GCTGGTCCAA
TGGGAAGGTA AACCTAAATG CCAAATTTGT GGTAGATCCT TGGCTTACCC GGGGGTTCTC
TGTCAAGAAT GTCAGCACAG ACAGCCCCCC TTCGTCCAGG CACGGGCAGT GGGACCCTAC
GAAGGGGGCC TGCGGGACGC CATTCACCTG CTCAAATACA AGGGCAGAAA AACCTTGGTG
CCGCTTCTGG GTAAACTGAT GTTGGAGCTG TTGCAGAGGC AGCCGGAGCT GTTACGGGCC
GAGCTTGTGG TGCCGATTCC CATGTCGCCA GGCAGAAGGC GCCAGCGGGG TTTTAATCAA
GCAGAACTGC TGGCCCGGGA AGTGGCCCGG GGCTTGCAAC TGCCTTTAAT GAGCAACGTA
TTAACCAAAC CTAAGGAAAC CCCGCCCCAA ACGGGTCTCG ATAAAAACCA ACGCAGAGAA
AATTTAAGAG GTGCTTTTGA TGTGAATACA CCGGAGGCCA TAAAGGGCAA AGCTATCTTG
ATCGTCGATG ATGTCTTTAC CACGGGTTCC ACCATGGCCG AGGTGGCAGA AACCTTGCAC
AAAAAGGGTG CCGGAAAGCT TTATGTTATT ACCCTGGCCA ATGCTGGCAA ATAA
|
|---|
| Protein sequence | MHFLLEALLN LLFPLPPGCQ LCGRTGDWDI CPTCSHWLVQ WEGKPKCQIC GRSLAYPGVL
CQECQHRQPP FVQARAVGPY EGGLRDAIHL LKYKGRKTLV PLLGKLMLEL LQRQPELLRA
ELVVPIPMSP GRRRQRGFNQ AELLAREVAR GLQLPLMSNV LTKPKETPPQ TGLDKNQRRE
NLRGAFDVNT PEAIKGKAIL IVDDVFTTGS TMAEVAETLH KKGAGKLYVI TLANAGK
|
|---|
| |