Gene Dred_3051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3051 
Symbol 
ID4956717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3312583 
End bp3313377 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content49% 
IMG OID640182239 
Productpolysaccharide deacetylase 
Protein accessionYP_001114378 
Protein GI134300882 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTATTT ATTTGGGCAA GTCCACCATT AATTATTTAA TCTGTGGTCT TTTGTTAATG 
GCCCTGTTGG TAGGGGCTGT TTCCTATAGT ACCCTTACTG CTTCCAAAGG AGTTTCGGTG
GAGCAGTGGC TGCGGGATGG CCAGGTGATT AAGCAGGTAA GCACCTCTAA AAAAGTGGTG
GCCCTCACCT TTGACGATGG CCCAAGTGAG CTCTATACCT CTAGGATTCT GGATGTTCTG
AAACAGAACG AAACCAGGGC TACTTTCTTT GTGGTGGGGA AACGGGCAGA AAAATATCCG
GCAGTGATTA AACGAATGGT AACAGATGGG CACGAGGTGG CAAACCATAC TTATACCCAC
CCTCTGTCCC CTGTAAAGTC GGCAAAACTG ACCAGAGAAT TAGATAAAAC CGATGATATT
GTCTATGGTA TCATCGGTCG GCATACCCAG TATTATCGTC CACCAGGTGG AAAGTGCACC
CATTCCATGA TCGACCCAGC CGTTGATAAG GGTTATAAAG TGATTCTCTG GACCAATCGG
GAAGATCCCA AGGATTTGTC CGACCCGGGG GTTCCGCAAA TTGTGTCCCA GGTGGTGGAC
TATGTACGGA ATGGTTCCAT TATTATTTTG CATGACTGTG GCGGGGACCG GAGCCAGACG
GTGGAGGCTT TGCCCCAAAT TATCCAGGGG GTACAGGAGA AGGGGTATGT CTTTGTGACA
GTCAGTGAAC TGCTGCGGGA TAGTAATACG GTGCCGGCCA TTGAGGAGTT TCGCATGGAG
AATTGGGTGG AATAA
 
Protein sequence
MVIYLGKSTI NYLICGLLLM ALLVGAVSYS TLTASKGVSV EQWLRDGQVI KQVSTSKKVV 
ALTFDDGPSE LYTSRILDVL KQNETRATFF VVGKRAEKYP AVIKRMVTDG HEVANHTYTH
PLSPVKSAKL TRELDKTDDI VYGIIGRHTQ YYRPPGGKCT HSMIDPAVDK GYKVILWTNR
EDPKDLSDPG VPQIVSQVVD YVRNGSIIIL HDCGGDRSQT VEALPQIIQG VQEKGYVFVT
VSELLRDSNT VPAIEEFRME NWVE