| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2965 |
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| Symbol | |
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| ID | 4956403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3218961 |
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| End bp | 3221318 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640182153 |
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| Product | pyruvate formate-lyase |
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| Protein accession | YP_001114293 |
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| Protein GI | 134300797 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1882] Pyruvate-formate lyase |
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| TIGRFAM ID | [TIGR01774] pyruvate formate-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0233628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAA GGGTAGCTGC ACTAAAACAA CAAAGTTTAG AAACCCCGCC CTGGCTATCC
ACAGAAAGGG CCCAATTATT AACGGGTTTT TATAAAAATG CCGGAGATAC GTCTACCCCA
GTTAAACGGG CCTTAGCCTT TCAATACTTA ATGGAGCACA AAACCATCTG TATAAATGAC
GGTGAGTTAA TTGTGGGGGA AAGGGGACCT GCTCCCCAGG CTTCCCCCAC CTACCCGGAA
CTGTGCTGTC ATAGTATGCA GGACTTACAA ATACTCAATG ATCGGGAGAA AATCCCCTTT
TTGGTTAGTG ACCAAGCAAA GGAAGTTTAC CGGGAAGAAA TAATACCCTT TTGGCAGGGA
AAATCCATGC GGGATAAAAT TTTTCAAGAG ATGTCCGAGG AGTGGAAACA GGCCTACGAG
CATGGGATTT TTACCGAATT TATGGAACAA AGGGCACCGG GTCATACGGT GTTGGACGAT
AAAATCTATC GCAAGGGTTT CTTGGATTTT CAAAGGGAAA TTGCTGAAAG CCTTCAAAAG
CTGGACTATT ATAATGACCC TAAGGCCTAC TATAAGCAGG AACAGCTTAA GGCCATGAGG
ATTTGTGCTG ATGCCATCAT ACGTTTTGCC CAGCGCCATG CGGAAAAGGC CCGGGAACTG
GCGAGCCAGG AAAGAAATGC AGGTAGAAGG GCCGAATTGG AACGCATTGC AGAAGTTTGT
ACCCATGTTC CTGCCCAGGC ACCCAGGGAC TTTTGGGAAG CCCTGCAGTC CTACTGGTTT
GTCCACCTGG GTGTCATTAC CGAATTAAAC ACCTGGGATG CCTTTAACCC CGGCAGATTG
GATCAGCATC TGAATCCCTT TTATCAAAGG GGGATACGGG AAGGAACATT AACAAAGGAT
CAGGCTAAGG AGTTGCTGCA GTGTTTTTGG GTCAAGTTTA ATAACCAACC GGCCCCACCC
AAAGTTGGGG TAACAGCGGA AGAAAGCGGT ACCTATACAG ACTTTGCCAA TATCAACAGC
GGCGGTTTAA AGCGGGATGG CTCTGATGGT GTCAATGAGG TTAGCTACCT GGTACTGGAT
GTCATTGATG AGATGAGGCT GCTGCAGCCC AGTTCGAACA TTCAACTCAG TAAAAAGAAC
CCGGACCGCT TCCTTAAACG GGCCTGCCAG ATCATTCGCA AAGGTTGGGG GCAACCCTCG
ATCTTCAATG CCGATGCCAT CATTGAAGAA CTACTGCGCC AGGGGAAAAC CATTGAAGAT
GCCCGTGCTG GCGGTGCCAG CGGCTGTGTG GAAACAGGGG CCTTTGGCAA GGAAAGCTAT
ATTTTAACCG GCTATCTCAA TCTGGTAAAA ATTCTGGAAC TGGTATTAAA TAACGGTCAA
GATCCACGAA CGGGCAGACA ACTGGGTCCT GCAACCGGTG ACCCCACTGG GTTTAATTCC
TTTGGCCAGC TATTAGAGGC CTTTCAGCAG CAGCTAAACT ATTTTGTGAA TATAAAAGTA
AAAGGCAACA ACATTATTGA GCGTTTATAT GCCACCTATA TGCCTGCTCC CTTTCTTTCA
ATCTTGATTG ATGATTGCAT TGCCAAGGGG CAAGATTATA ACGACGGTGG TGCCCGCTAT
AATACCACCT ATATCCAGGG GGTTGGTTTG GGCAGCCTAA CGGATTGCCT GTCTGCCTTA
AAATATCATA TCTTTGAGCA AGGGACCTTT ACCATGCCTC AACTACTAGA AGCATTAAAC
TTAAACTTTG CCGGTCAGGA AAAGGTGCGT CAGGTGCTCC TAAATAAAAC ACCGAAATAC
GGCAATGATG ATGATTTTGC TGATGAAATA ATGACAACCA TCTTTGATAT CTTCTACCAG
GAAGTTAACG GGAGGAGCAA TACCAAGGGT GGCGTTTACC GGATTAACCT TTTGCCAACC
ACCTGTCATG TTTATTTTGG TTCAGTGATT GGTGCCACAC CGGATGGCCG AAGGGCCTGG
CAACCACTAT CCGAAGGGAT TTCCCCAGTT CAGGGTGCCG ATCGTCAAGG TCCTACGGCG
GTGATTAAAT CGGCTGCTAA GATGGATCAC ATACGCACCG GGGGCACCCT GTTGAACCAG
AAGTTTGCTC CTTCGGTGCT GGCAGGTGAC GAGGGTCTTA ACAAACTAAC TCATTTGGTG
CGGGCCTATT TTAAGTTGGA CGGTCACCAT ATACAATTTA ATGTGGTGGA TGCTAAAATC
CTACGGGAGG CCCAACGGAA CCCTGAACAA TACCGAGACT TGATTGTCCG GGTAGCGGGT
TACAGTGATT ATTTTTGTAA TCTAAGTAAA GCCTTACAGG ATGAAATTAT TGCCAGAACC
GAGCATAATT CTATTTAA
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| Protein sequence | MKERVAALKQ QSLETPPWLS TERAQLLTGF YKNAGDTSTP VKRALAFQYL MEHKTICIND
GELIVGERGP APQASPTYPE LCCHSMQDLQ ILNDREKIPF LVSDQAKEVY REEIIPFWQG
KSMRDKIFQE MSEEWKQAYE HGIFTEFMEQ RAPGHTVLDD KIYRKGFLDF QREIAESLQK
LDYYNDPKAY YKQEQLKAMR ICADAIIRFA QRHAEKAREL ASQERNAGRR AELERIAEVC
THVPAQAPRD FWEALQSYWF VHLGVITELN TWDAFNPGRL DQHLNPFYQR GIREGTLTKD
QAKELLQCFW VKFNNQPAPP KVGVTAEESG TYTDFANINS GGLKRDGSDG VNEVSYLVLD
VIDEMRLLQP SSNIQLSKKN PDRFLKRACQ IIRKGWGQPS IFNADAIIEE LLRQGKTIED
ARAGGASGCV ETGAFGKESY ILTGYLNLVK ILELVLNNGQ DPRTGRQLGP ATGDPTGFNS
FGQLLEAFQQ QLNYFVNIKV KGNNIIERLY ATYMPAPFLS ILIDDCIAKG QDYNDGGARY
NTTYIQGVGL GSLTDCLSAL KYHIFEQGTF TMPQLLEALN LNFAGQEKVR QVLLNKTPKY
GNDDDFADEI MTTIFDIFYQ EVNGRSNTKG GVYRINLLPT TCHVYFGSVI GATPDGRRAW
QPLSEGISPV QGADRQGPTA VIKSAAKMDH IRTGGTLLNQ KFAPSVLAGD EGLNKLTHLV
RAYFKLDGHH IQFNVVDAKI LREAQRNPEQ YRDLIVRVAG YSDYFCNLSK ALQDEIIART
EHNSI
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