| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2954 |
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| Symbol | |
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| ID | 4956378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3207111 |
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| End bp | 3208205 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640182142 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001114282 |
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| Protein GI | 134300786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000249187 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTA AATGGAAGCT CTGGTTGATT CCGGTGGTAT TGATAGTAGC CTTTAGTGTT
TTCAAAGGTG GTGCCTCCTG GGACAAGAAG GAAATCAAGC AGGATGTAGC TGTGCCAACA
GTGGCCACTC GGCAGGTAAG TAAAGTGAAT ATTGAGAATT CTTTATCTGT TACTGGCAGT
ATTGAGGCCT TTCATCAAGC AGTTATCTTT GCAAAGGTAC CCTCGGGGCG TGTTAGTAAA
GTTGCGGTTC AAAACGGGGA TCGGGTAGCT GCCGGTCAAT CCCTGATCTA TTTAGAAAGC
CAGAGCTTTG CCAATACACT GAAAATAAAC CAGGCAACCT TAAAGAAAGC GGAAACAGGA
CTTGCCACTG CCAGGTCTGA TTATCAGCGT TTTCAAGAGC TTTATCAGCA GGGTGCTGTA
TCTCAGAAGG AATTTGAGGA CAAAGAAGCA GCGGTGAAGT TGGCCGAAGC AGAGGCTAGT
TCGGCTGCGG CGGCGGTGGC CACTGCGGAG GAAGATTTGC AAAATAGCAC CATCACTTCT
CCCATTGCGG GGTTGGTGGC CAATCGCAGT GTGACCACTG GCCAGATGGT CTCTCCCCAG
GGGTCCTCTC TGATGTCAGT GGAGGATCTA TCCTCTGTCT ACGTGGTGGT AAACATTGAA
CAGAAGGATT TGTCTATGAT TAAGCCTGGA CTGAAGGCAG ATGTAACAGT TGATGCCTAC
GGTAATAAAA AATTTACCGG TGTGGTGGAA GTAGTTAATC CGGTGGCAAA AAAGGAAGCC
AGGGTTTTTG AAACTAAGAT TAAGGTAGAC AATAAAGATA TACTTTTAAA ACCTGGTATG
TTTGCCAAGG TACAGATTAA AATCGGAGAA ACGAAAGAGG TACTGACGGT ACCCCAGGCA
GCACTGGCAT CAAAACAGGG TATGTATTTT GTTTTTCTCC CCAATGGTGA TAAGGTAAAA
CGCCAGCAGG TGGAAATTGG ACAGATCATT AACCAGTTAG TTGAAGTAAA ATCAGGTCTT
AGCGAGGGCC AGCAAGTGGT AGTAACCAAC GTCAATAAAC TAAAGGACCA GGATAAGGTA
AAGATCGCCA AGTAA
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| Protein sequence | MKSKWKLWLI PVVLIVAFSV FKGGASWDKK EIKQDVAVPT VATRQVSKVN IENSLSVTGS
IEAFHQAVIF AKVPSGRVSK VAVQNGDRVA AGQSLIYLES QSFANTLKIN QATLKKAETG
LATARSDYQR FQELYQQGAV SQKEFEDKEA AVKLAEAEAS SAAAAVATAE EDLQNSTITS
PIAGLVANRS VTTGQMVSPQ GSSLMSVEDL SSVYVVVNIE QKDLSMIKPG LKADVTVDAY
GNKKFTGVVE VVNPVAKKEA RVFETKIKVD NKDILLKPGM FAKVQIKIGE TKEVLTVPQA
ALASKQGMYF VFLPNGDKVK RQQVEIGQII NQLVEVKSGL SEGQQVVVTN VNKLKDQDKV
KIAK
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