| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2839 |
|---|
| Symbol | |
|---|
| ID | 4958600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3080286 |
|---|
| End bp | 3080648 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640182020 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_001114168 |
|---|
| Protein GI | 134300672 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4120] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000198537 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA TTGGCTTAGG CGTTTGGGAG CAAGGTTTAC TATGGGGTGT TATGGTACTG
GGGGTCTTTT TAACCTTCAG GGTCCTTGAT TTTCCGGACC TGACAGTGGA CGGTAGCTTT
ACACTAGGAG CTGCCGTGGC AGCCAGTATC ATTCTTGAAG GTCATAATCC CTGGGTAGGT
ACCTTTTTGG CAATGGTTTC TGGCATACTG GCTGGTTCAG TTATAGGCTG GTTAAACACG
CGGCTTCGTA TTTCTCCTTT ATTATCCGGT ATCTTGGTCA TGATTGCCCT GTACTCCATC
AATTTACGAA GGTACACTAA GAGGCGTCTA TACAGACGCC CTTATGCATG CAGGAAAGTA
TAA
|
|---|
| Protein sequence | MTTIGLGVWE QGLLWGVMVL GVFLTFRVLD FPDLTVDGSF TLGAAVAASI ILEGHNPWVG
TFLAMVSGIL AGSVIGWLNT RLRISPLLSG ILVMIALYSI NLRRYTKRRL YRRPYACRKV
|
|---|
| |