| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2834 |
|---|
| Symbol | |
|---|
| ID | 4958603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3074754 |
|---|
| End bp | 3076385 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640182015 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_001114163 |
|---|
| Protein GI | 134300667 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00723472 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCTT ATGGGGCTTG GATAATCGGG CTGGCAGTGG CCTATACAGC CATCCTGATT
ATTCTAGGAA ACATAGTAAG AAAAAAAGCC ACCAGTGGTG AAAGCTACTG GGTTGGTGGA
CGTAACTTTA AACCCTGGAT GGTATTTGTT TGTATAACGG GCTTATTTTC AGGTTCATCT
TTTATTTCCA TTATGGAATT ATCTTATCTA AAAGGGATTT CTGCAGGTTG GTACGGTGTA
GCGGAGATGT TGCACGTCCT TATTATTGCA ATTCTTCTAA TTGGAACCTT CCGTAAACGC
ATGATGGTTA CGGTAAGTGG TTTGATTGGC GATTCCTTTG GTCGTATGGC AATGGGAGTG
GCCGGCACCA TTACGGCCTT TACCTTCCCC ATGTGGTCCG TGGCCACAGC ATTGTCCTTT
GCTTCGGCGG TTAGTGCATT CACCAATATT CCCATTACCA CATCTGTTGC CTTTGTGGCG
ATCTTGCTTT TGATTTACCT GCAGGCCGGC GGCATGTGGT CGGTTGTTAT GACACAAACC
GCTAACGCCA TTATGTTCTT TCTGATGTTT ATTATTGGTG TAACAGCCTT TTTCATTAAC
CCTGGCATTG AAGGATTAAG GCACCTGGCA GAGGTTAAGC CTGCTATGTT TGATAGCACA
GCGGTGGGGC TGCAGGTGAT TATTTCCTGG TTTGCAACCT TCATGATTAA CGTATTACTG
GCTCAGGCTG CATTCCAAAT GGCCCTGTCC TGCCGGACAC CAGAAGAAGG ACGTAAAGGC
ATGCTGATGG CCTTTGGAGC AAACATTTTC TTTGTTTTCT TTGGTGTTCT TTTCGGTCTG
GCTGCTGCAG CCGTTGTACC GGATGGTGCC CGTGGCATGG TGGCCGTTCC ACAATATATG
GCAACGGTTT TACCGGCGCC GCTGGTTGGT TTGTTCTTCC TGGGCATTTG GTCCTGCGCC
CTGGGTTGGG GGGCTTCCTG CCAGTTCTCT GGTTCCACCA GTTTAGGTCG TGACGTAACC
GGGGCCATTA ACCCGAGCCT TACTGACACG CAAAAAGTAA CTTATACAAA GTGGTCGCTG
GTTATTCTGA CAGCCCTCAT GATTATTCTG GGCTACCTGC GCAGCGAGCA GGCTGCCTGG
TGGAATGTAT TTGCCTGGAC CCTGCGCAAT GGTGCCACCT TTGCCCCGGT GGTTGCAGCA
CTCTTCTGGC CACTGGCTAC CAAACGGGCT GCATCCCTTT CCCTGGCAGT GGGCTTCGTC
TCAGGCCTAA GCTGGTATGC CCTGGGTAAC TGGGATCCTG CTAAGTTCTA CTTAAATGTT
CACCCTGTAT TCTTTGGTAT GTCCTTAAAT ATGCTTACCA TGCTAGTGGT TACCCTAGTG
GAGCAATCCG GCAAATTTAG GGTAGGCGGT GAGCTTACTA CAGTGCGCAA AAATGTAGCA
ATGGTAGCAG TTGCCCTTGG CGGTCTGTCT CTTATATCCA TTGCAACTGC CTTCAATTGG
TTATTTACCA AAGGTTTACT GGGCCTGGCA TGCTTCACGG TTGTGGCCGG TATCTTCATC
ATGACCATAT CTGTAACATC ACCCATCGAA GATAAAAGTT CAGTAAAATC TCTGAAAACC
CAAGAAGCTT AA
|
|---|
| Protein sequence | MSAYGAWIIG LAVAYTAILI ILGNIVRKKA TSGESYWVGG RNFKPWMVFV CITGLFSGSS
FISIMELSYL KGISAGWYGV AEMLHVLIIA ILLIGTFRKR MMVTVSGLIG DSFGRMAMGV
AGTITAFTFP MWSVATALSF ASAVSAFTNI PITTSVAFVA ILLLIYLQAG GMWSVVMTQT
ANAIMFFLMF IIGVTAFFIN PGIEGLRHLA EVKPAMFDST AVGLQVIISW FATFMINVLL
AQAAFQMALS CRTPEEGRKG MLMAFGANIF FVFFGVLFGL AAAAVVPDGA RGMVAVPQYM
ATVLPAPLVG LFFLGIWSCA LGWGASCQFS GSTSLGRDVT GAINPSLTDT QKVTYTKWSL
VILTALMIIL GYLRSEQAAW WNVFAWTLRN GATFAPVVAA LFWPLATKRA ASLSLAVGFV
SGLSWYALGN WDPAKFYLNV HPVFFGMSLN MLTMLVVTLV EQSGKFRVGG ELTTVRKNVA
MVAVALGGLS LISIATAFNW LFTKGLLGLA CFTVVAGIFI MTISVTSPIE DKSSVKSLKT
QEA
|
|---|
| |