Gene Dred_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2780 
Symbol 
ID4955763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3015402 
End bp3016160 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID640181960 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001114109 
Protein GI134300613 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCAGA CATATAAAAA AGCTGAACAA GCCATGTCCT TTTTATCCTC AGTGGCTATA 
CTCCTGCTGC TATGGTGGTT ACTATCGCTG ACATTAAAAA GCCCAGCGGT GCCACTGCCG
CTGGATGCTT TGCACAGCTT TTTAATTAGC CTCCGTGGGG AGCTTCTTTC TCACCTCGGT
GTAAGCCTCT ATCGGGTACT CTTGAGCCTG TTGTCAGCCA CCCTGCTGGC AGTGCCACTG
GGTATCTTCC TAGGCAAGAA CCCAGAAGTT GATAGAAAAG CGGCCCCCCT GCTTTATTTA
ACCTATCCCA TTCCCAAAGT GGTTTTTATG CCTATTTTCT TAATTATATT AGGTATTGGT
GATAGTTCTA AAATTCTGTT AATTACACTA ATCACTTTCT ACCAAATTTT AGTTACCACC
CGGGATGCCG CAAAAAATAT GGCAAAGGAA TATATTTTTT CTCTGAAATC CCTAGGTGCC
AGCTCCTGGG ACCTGTACCG CCACGTTTAT CTACCGGGTT GCCTGCCAGC CATCCTAACC
GCCCTGAGGC TAGGTTTGGG TACTGCCATG GCGGTACTCT TTCTGGCCGA AACCTACGCC
ACCCAGACAG GCATTGGCTT TTTTATTATG GATTCACTTA GCCGGATGAA TTATGAAGAA
ATGTTTGCCG GTATTATTGC TATGGGGTTA ATGGGTTTTT TCCTTTACAT ACTGCTGGAT
CAAGCAGAAA AGATCTTATG TTCGTGGATT CATATTTAG
 
Protein sequence
MRQTYKKAEQ AMSFLSSVAI LLLLWWLLSL TLKSPAVPLP LDALHSFLIS LRGELLSHLG 
VSLYRVLLSL LSATLLAVPL GIFLGKNPEV DRKAAPLLYL TYPIPKVVFM PIFLIILGIG
DSSKILLITL ITFYQILVTT RDAAKNMAKE YIFSLKSLGA SSWDLYRHVY LPGCLPAILT
ALRLGLGTAM AVLFLAETYA TQTGIGFFIM DSLSRMNYEE MFAGIIAMGL MGFFLYILLD
QAEKILCSWI HI