| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2769 |
|---|
| Symbol | |
|---|
| ID | 4956016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3002495 |
|---|
| End bp | 3003523 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640181949 |
|---|
| Product | basic membrane lipoprotein |
|---|
| Protein accession | YP_001114098 |
|---|
| Protein GI | 134300602 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG CAAGACTTTT GCTGGTGGCC CTGTTAATGA TGAGTTTGTT GCTGGCAGGG
TGTGGCAACA AAGAAGAAAA AGCAACCCAA GGGGGTAAAG AGGACGGGAA AAAACCCCTG
AAAGTTGCTT TGATTCTGCC GGGCAAGATC GATGATGTCT CTTGGAATCA GGCTATGTAT
GAAGGTGTAA AGGCTCTAGA AAAGGAATAT GCCGGTAAAA TTGAAGTGAC CTACACAGAA
CAAGTATACG AAGTATCTAA CATTGAACCA ACCCTGAGGG ACTTTGCTTC CCAGGGCTAT
GATTTGATCA TTGGTCATGG TTTCCAATTT ATGGAGCCCA TTATCAAAGT GGCCCAAGAG
TATCCCGAAA CCAAATTTGC CCTGGGAACA GGATTTAAGA CCCTTCCCAA TACCTGTGTC
TATGATGTTA AGCTGGAGGA CGGTGGCTAC CTGATGGGAA CCCTGGCCGG CCTCATGACC
AAGACCAATA AAATTGGTGT AGTGGGCGGC GCTGATGTGG CAGAAATCTA CCGTGGCCAC
GAAGCCTTTA AACATGCTGC CAAGCAGGTT AATCCCGATA TTCAAATTCA GGAACTTTAC
ACCGGAGACT GGCGGGATGC TGCCAAGGCC AAAGAAGGGG CCATTTCCAT GTATGATGCC
GGTGCCGATG TAATTTGGCA CTCCGGTGAT GGCATTGGCT TGGGTGTCGT GGATGCAGGG
AAAGAAAAAA ACAAAACAGT ATTGGGCAAT GTTGCTGATC AAAATGTACT GGCGCCCAAC
AATGTATTAT CCGGTATTGC CTACAACTGG ACTCCTGTGG TGAAAGAAAT GGTTGACGAT
ATTTTAAACA ACAATTTTAC CAACAGAGAT AAGAAATTTT ACTGGTTAAC CGCTGCCAAT
GGTGGTGTAA CGGTTGCTCC ATTCCATGGT TTAGATAGCA CCGTTCCTGC AGAGGTGAAA
GCGAAACTGG AAGAAGTGAA GAAAGGCTTG GCCAATAACA CAGTGGAAAT GCCTAAATTT
GAAAAATAA
|
|---|
| Protein sequence | MKKARLLLVA LLMMSLLLAG CGNKEEKATQ GGKEDGKKPL KVALILPGKI DDVSWNQAMY
EGVKALEKEY AGKIEVTYTE QVYEVSNIEP TLRDFASQGY DLIIGHGFQF MEPIIKVAQE
YPETKFALGT GFKTLPNTCV YDVKLEDGGY LMGTLAGLMT KTNKIGVVGG ADVAEIYRGH
EAFKHAAKQV NPDIQIQELY TGDWRDAAKA KEGAISMYDA GADVIWHSGD GIGLGVVDAG
KEKNKTVLGN VADQNVLAPN NVLSGIAYNW TPVVKEMVDD ILNNNFTNRD KKFYWLTAAN
GGVTVAPFHG LDSTVPAEVK AKLEEVKKGL ANNTVEMPKF EK
|
|---|
| |