Gene Dred_2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2680 
Symbol 
ID4956200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2902662 
End bp2906186 
Gene Length3525 bp 
Protein Length1174 aa 
Translation table11 
GC content49% 
IMG OID640181861 
ProductS-layer domain-containing protein 
Protein accessionYP_001114011 
Protein GI134300515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAACC TCTTTTTTAA TTCATCGATT GGCAAGAGAA TCGTGTTGTT GTTCATGGTA 
TGTTTTTTAA CCAATCTGCT ACTTCCTTTT TCTGCGTTTG CCAACGAACC TACAACAGCC
AGTGGAGGAG AATTAGCTGG CAAAGCCGTA GAGTTCATAC ATGAAAAATA TATGGCCGGG
GAAAGTTTGG ACGGCTATAC GGCTTATGTT TTAACCCTAG CTGGGGAAGA TTTGGGTTCT
GACAAGTGGA CAAAACCATA TTGCCCGTCG GCCAAACAAG ACTTGGTTAA GGCTACGGAC
GCCATCACCA TCGGACACGA ACTGGGATTG GAAAAAAACA GCTTGATTAC TTACCTTCTG
GTTCACGAGA ATCCGGATGG TAGCTTTGGG CCTTATGCTA ACGAATATGG AACCAAAATA
GCCTTAGAAG CCCTGGCTCT GATCAAAGAT GATTTGGACG GAGCCTTAAA AGAAAGAGTG
GAACAGGCTA TCACCAAGGC CGTTGCTTTT TTGAAAAGCC GTTATCCCCT TTCAGAGGAT
TATAGTAACA GCGGTTTTGC CGCCTTTGAT GCTCGAACAG TTGTAGCATT AAAAACTGCC
GGAGAAGACT TAACCCAGGA TGGCTGGGTA AAAAACGGAA TTTCCTTACA AGACAAAGCC
GTAGCCGAAG CCGTATATGC TGCAGAAAAT GCCAACGATA AATCAGCCAC TGAATTGGCT
AAACATTTAG GTGCTCTATA TGCCCTTGAA CCAACCCATG AAAAGGTGAG TCAACTGGGC
GATGCTATAC GTAGCAAAGC TTCTGTTACA GAAGAAGGGC AGGTTTATTT CGGTTCAGGC
GGAGATTTTG GCGTCTTTGA CCAGGTGGCT GTGTTAAGAG CCTTGGGGGA AACCAACCAA
CTAACCGGTG TGGATCAGGT TAATGCCCTG ACCTACCTTA ATGAATTCCA AAGAGACCAT
GATGAGTGGG GCACTCCGGC AGGCAAAGCC TATGGTACTT CATATACACC CAAGGATTCG
GAGTTGACCG CCCAGGCGGT GACTGCTTTA TCGAAATTTG ATTCCGATGT GGCAGGGGAA
GCCATCGATG ACGCCTTAAC CTACCTAAAG AGTGTACAAG ACAAGGATAC GGCAGCCCTA
CCTGTCAGCG GAGATAGCAG TACCGCGGCA GCCGAGTTGC TAATTGCCTT AAAAAAACAA
GGACTTACCT ATGACCAGTA CGCAGGTGAA AATGCTCTTT GGGCCAAAGT TCCCCAGGCT
AAGTCCGTAG GTTTAAACCT ATTGGCCATG AAGGGATTTG AAGAGGCCGA GCGTGTGGAG
AAGCTGACGT TTTTATTACA TGATCAGCAT TCGTCTCAGG GCTTTTCCAA CAACCTCTTT
GGTGATGTAT GGGCGTATCT GGCCCTGGGG ACAGAGGGAC AGATAGATGC CATTAAGGAC
GATGCCAGGA TCTTCCTGCT CGATCGGCAG ATTAGTGATG GGGACAACAT GGGAGCATGG
GATAGTACAT ACCCAGATTA TCCCGACTTT ATGGCCACTT CCCAGGCGGT TCGATCCTTA
ACCTACCTAA AGGGCTATGC CACCGATGCA GATGTTGCTG CCAGTATCAA AAAAGGGGTG
GACTATCTTA AAGAAAAGCA AAGGAATGAT GGCAGCTATC AAACTGGCTG GGACGATGCG
GTGGTAGACA CTTCCGAGAT GATCCTAACC ATGAAGCGTT TGAACCAGGA TCCCCGGGAA
TTAAAAAGTG GTGAGGGCAA AAGCCCCGTG GACTGGCTGC TGGAAAAATC CCTAAACAAT
GATGGTAGCT TTGGTGACAG CAAAAATGTT TTTGGCGCCA CCATAGCCCT AAATGCCTTT
CACACGTTAG GTTTTACTCC CTCCTCCGGC GGTTCTACCC CAGGGGACGG CGGTAACACA
CCTGGGGTAG ATACTGCCAG TGTAGGTGTG ATAGTGGTTG GAAAAACAGG TAGCAAGCTG
TTTGGCCCCT CCTATGTCAC TGTAGAAAAA ACTGGCCAGT GGGGCATGAC TGCTATGGAA
GCTTTACACC AGACCGGGCT TAGTTACAGT GACCGAGACG GTTTCGTCAC GGCCATTGAA
GGAGAAGCCA ACCAGGGTAT GACGGGTTGG ATGTATATGG TTAACGGACG AACCCCCATG
GTTATGGCTA AGGATCAGCC TGTTAAGGAT GGGGATAAGG TTATTTGGTG GTACAGCTTG
GACATCAATA ATCCCGGCCC TACCTGGGAA ACTGCAACTG ATGGAAGTTG GTCCAATCAG
CCGGCGGTTA ATTCGAACAT CCCCTCATCT GTGCAAGAAC AAGTGGACTT ACTCCCGTCC
TCTTTACAAC CTACAAGCAG TGTTGCAAAA ACCTTGGAGG ATATTCAGAA GGTACTTGGC
ATTGCAGGCA GCACTTCTGT TTTGGGGTCG CTAAGTGATG TAAAGCAGGC GGTGGCGGTG
GTTGCCCCTG ATAAACTGAT GAAGGGGGAA GAAGCCCAAG AACGGCAAAA AAAGCTGCAA
GCTAATCGAG TAGAGATTGA GCAACAGGTG GAAGCCAATA AAGGGGCGGT TGTCTCCGAT
GCAGGAGAAG AAATGGCTCT GGTGATCCCG GCCAATGCCC TTGGTGCTAG TGCGCAAATT
ACCGTCCGTG AAGAAACACC ATTGCCTATG TCACCATCCG ACATCAACAG CAGTATCCAA
GGCTGGGAGA AACTTCCCGA AGGATTCCGA GCTGTTTCTC CGGTTTACCA CATGGGACCT
GAGGGGTTGA CTTTTAGCGA ACCGGTAACG GTGGCCATTC AAGTGGCTTT GCCCGAAAAT
GTTCAGCCAG AAAACCTAGT TTTTTCTTGG TACAATCCCC AAGAAAAAAC CTGGGTGGCA
TTGCCTGCTG TTTTTGATGC AGAGAGAAGC CTTATCATGG CTCGTATTTC CCACTTCTCC
CGCTATATGG TGACAGGAAA AACAACTACG CCAACCATGG ATCCTCAACC AGCCAGAAAG
ACTTTTGCTG ATTTAACCGG CTTTGACTGG GCCCGGGACG CCATTGAATC GTTGGCTGGT
CAGGGGATTA TTAGCGGCGT ATCTGAGGAG CGTTTTGAAC CGGGCCGTAC CATTACCCGG
GCCGAACTGG CTACCTTATT GGCTCGCATC AAAAATCTCT CTGCCAGTGA TATGTACCCC
TTCTCAGATA TTTCTCCCAC CGACTGGTTT GCCTCTCCGG TAAGCGCTGC TGCTAAGGCT
AAGATTGTCA GCGGGTATCC GGATGGTACC TTTGACCCGC ATCATCCGGT GACCCGGGAA
GAGATGGCGG TGATGCTGGT GAGGGCTTTC CAATTGACCG GAGGGGAAAA ACCGGTGACC
TTTAACGACC GGGAGACCAT TGGACCCTGG GCTTCCGAAA GTGTTGCGAC CATGTTGGAC
CAGGGCGTAA TCAAGGGATA TGAAGATAAT ACCTTTCGAC CCAAAAACCC GGCTACCCGG
GCAGAAGTCG CTGTGCTACT CCATCGTTTA GTATCTATGA AGTAG
 
Protein sequence
MGNLFFNSSI GKRIVLLFMV CFLTNLLLPF SAFANEPTTA SGGELAGKAV EFIHEKYMAG 
ESLDGYTAYV LTLAGEDLGS DKWTKPYCPS AKQDLVKATD AITIGHELGL EKNSLITYLL
VHENPDGSFG PYANEYGTKI ALEALALIKD DLDGALKERV EQAITKAVAF LKSRYPLSED
YSNSGFAAFD ARTVVALKTA GEDLTQDGWV KNGISLQDKA VAEAVYAAEN ANDKSATELA
KHLGALYALE PTHEKVSQLG DAIRSKASVT EEGQVYFGSG GDFGVFDQVA VLRALGETNQ
LTGVDQVNAL TYLNEFQRDH DEWGTPAGKA YGTSYTPKDS ELTAQAVTAL SKFDSDVAGE
AIDDALTYLK SVQDKDTAAL PVSGDSSTAA AELLIALKKQ GLTYDQYAGE NALWAKVPQA
KSVGLNLLAM KGFEEAERVE KLTFLLHDQH SSQGFSNNLF GDVWAYLALG TEGQIDAIKD
DARIFLLDRQ ISDGDNMGAW DSTYPDYPDF MATSQAVRSL TYLKGYATDA DVAASIKKGV
DYLKEKQRND GSYQTGWDDA VVDTSEMILT MKRLNQDPRE LKSGEGKSPV DWLLEKSLNN
DGSFGDSKNV FGATIALNAF HTLGFTPSSG GSTPGDGGNT PGVDTASVGV IVVGKTGSKL
FGPSYVTVEK TGQWGMTAME ALHQTGLSYS DRDGFVTAIE GEANQGMTGW MYMVNGRTPM
VMAKDQPVKD GDKVIWWYSL DINNPGPTWE TATDGSWSNQ PAVNSNIPSS VQEQVDLLPS
SLQPTSSVAK TLEDIQKVLG IAGSTSVLGS LSDVKQAVAV VAPDKLMKGE EAQERQKKLQ
ANRVEIEQQV EANKGAVVSD AGEEMALVIP ANALGASAQI TVREETPLPM SPSDINSSIQ
GWEKLPEGFR AVSPVYHMGP EGLTFSEPVT VAIQVALPEN VQPENLVFSW YNPQEKTWVA
LPAVFDAERS LIMARISHFS RYMVTGKTTT PTMDPQPARK TFADLTGFDW ARDAIESLAG
QGIISGVSEE RFEPGRTITR AELATLLARI KNLSASDMYP FSDISPTDWF ASPVSAAAKA
KIVSGYPDGT FDPHHPVTRE EMAVMLVRAF QLTGGEKPVT FNDRETIGPW ASESVATMLD
QGVIKGYEDN TFRPKNPATR AEVAVLLHRL VSMK