Gene Dred_2680 details

Gene Information

• Locus tag: Dred_2680
• ID: 4956200
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: -
• Start bp: 2902662
• End bp: 2906186
• Gene Length: 3525 bp
• Protein Length: 1174 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640181861
• Product: S-layer domain-containing protein
• Protein accession: YP_001114011
• Protein GI: 134300515

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAACC TCTTTTTTAA TTCATCGATT GGCAAGAGAA TCGTGTTGTT GTTCATGGTA 
TGTTTTTTAA CCAATCTGCT ACTTCCTTTT TCTGCGTTTG CCAACGAACC TACAACAGCC 
AGTGGAGGAG AATTAGCTGG CAAAGCCGTA GAGTTCATAC ATGAAAAATA TATGGCCGGG 
GAAAGTTTGG ACGGCTATAC GGCTTATGTT TTAACCCTAG CTGGGGAAGA TTTGGGTTCT 
GACAAGTGGA CAAAACCATA TTGCCCGTCG GCCAAACAAG ACTTGGTTAA GGCTACGGAC 
GCCATCACCA TCGGACACGA ACTGGGATTG GAAAAAAACA GCTTGATTAC TTACCTTCTG 
GTTCACGAGA ATCCGGATGG TAGCTTTGGG CCTTATGCTA ACGAATATGG AACCAAAATA 
GCCTTAGAAG CCCTGGCTCT GATCAAAGAT GATTTGGACG GAGCCTTAAA AGAAAGAGTG 
GAACAGGCTA TCACCAAGGC CGTTGCTTTT TTGAAAAGCC GTTATCCCCT TTCAGAGGAT 
TATAGTAACA GCGGTTTTGC CGCCTTTGAT GCTCGAACAG TTGTAGCATT AAAAACTGCC 
GGAGAAGACT TAACCCAGGA TGGCTGGGTA AAAAACGGAA TTTCCTTACA AGACAAAGCC 
GTAGCCGAAG CCGTATATGC TGCAGAAAAT GCCAACGATA AATCAGCCAC TGAATTGGCT 
AAACATTTAG GTGCTCTATA TGCCCTTGAA CCAACCCATG AAAAGGTGAG TCAACTGGGC 
GATGCTATAC GTAGCAAAGC TTCTGTTACA GAAGAAGGGC AGGTTTATTT CGGTTCAGGC 
GGAGATTTTG GCGTCTTTGA CCAGGTGGCT GTGTTAAGAG CCTTGGGGGA AACCAACCAA 
CTAACCGGTG TGGATCAGGT TAATGCCCTG ACCTACCTTA ATGAATTCCA AAGAGACCAT 
GATGAGTGGG GCACTCCGGC AGGCAAAGCC TATGGTACTT CATATACACC CAAGGATTCG 
GAGTTGACCG CCCAGGCGGT GACTGCTTTA TCGAAATTTG ATTCCGATGT GGCAGGGGAA 
GCCATCGATG ACGCCTTAAC CTACCTAAAG AGTGTACAAG ACAAGGATAC GGCAGCCCTA 
CCTGTCAGCG GAGATAGCAG TACCGCGGCA GCCGAGTTGC TAATTGCCTT AAAAAAACAA 
GGACTTACCT ATGACCAGTA CGCAGGTGAA AATGCTCTTT GGGCCAAAGT TCCCCAGGCT 
AAGTCCGTAG GTTTAAACCT ATTGGCCATG AAGGGATTTG AAGAGGCCGA GCGTGTGGAG 
AAGCTGACGT TTTTATTACA TGATCAGCAT TCGTCTCAGG GCTTTTCCAA CAACCTCTTT 
GGTGATGTAT GGGCGTATCT GGCCCTGGGG ACAGAGGGAC AGATAGATGC CATTAAGGAC 
GATGCCAGGA TCTTCCTGCT CGATCGGCAG ATTAGTGATG GGGACAACAT GGGAGCATGG 
GATAGTACAT ACCCAGATTA TCCCGACTTT ATGGCCACTT CCCAGGCGGT TCGATCCTTA 
ACCTACCTAA AGGGCTATGC CACCGATGCA GATGTTGCTG CCAGTATCAA AAAAGGGGTG 
GACTATCTTA AAGAAAAGCA AAGGAATGAT GGCAGCTATC AAACTGGCTG GGACGATGCG 
GTGGTAGACA CTTCCGAGAT GATCCTAACC ATGAAGCGTT TGAACCAGGA TCCCCGGGAA 
TTAAAAAGTG GTGAGGGCAA AAGCCCCGTG GACTGGCTGC TGGAAAAATC CCTAAACAAT 
GATGGTAGCT TTGGTGACAG CAAAAATGTT TTTGGCGCCA CCATAGCCCT AAATGCCTTT 
CACACGTTAG GTTTTACTCC CTCCTCCGGC GGTTCTACCC CAGGGGACGG CGGTAACACA 
CCTGGGGTAG ATACTGCCAG TGTAGGTGTG ATAGTGGTTG GAAAAACAGG TAGCAAGCTG 
TTTGGCCCCT CCTATGTCAC TGTAGAAAAA ACTGGCCAGT GGGGCATGAC TGCTATGGAA 
GCTTTACACC AGACCGGGCT TAGTTACAGT GACCGAGACG GTTTCGTCAC GGCCATTGAA 
GGAGAAGCCA ACCAGGGTAT GACGGGTTGG ATGTATATGG TTAACGGACG AACCCCCATG 
GTTATGGCTA AGGATCAGCC TGTTAAGGAT GGGGATAAGG TTATTTGGTG GTACAGCTTG 
GACATCAATA ATCCCGGCCC TACCTGGGAA ACTGCAACTG ATGGAAGTTG GTCCAATCAG 
CCGGCGGTTA ATTCGAACAT CCCCTCATCT GTGCAAGAAC AAGTGGACTT ACTCCCGTCC 
TCTTTACAAC CTACAAGCAG TGTTGCAAAA ACCTTGGAGG ATATTCAGAA GGTACTTGGC 
ATTGCAGGCA GCACTTCTGT TTTGGGGTCG CTAAGTGATG TAAAGCAGGC GGTGGCGGTG 
GTTGCCCCTG ATAAACTGAT GAAGGGGGAA GAAGCCCAAG AACGGCAAAA AAAGCTGCAA 
GCTAATCGAG TAGAGATTGA GCAACAGGTG GAAGCCAATA AAGGGGCGGT TGTCTCCGAT 
GCAGGAGAAG AAATGGCTCT GGTGATCCCG GCCAATGCCC TTGGTGCTAG TGCGCAAATT 
ACCGTCCGTG AAGAAACACC ATTGCCTATG TCACCATCCG ACATCAACAG CAGTATCCAA 
GGCTGGGAGA AACTTCCCGA AGGATTCCGA GCTGTTTCTC CGGTTTACCA CATGGGACCT 
GAGGGGTTGA CTTTTAGCGA ACCGGTAACG GTGGCCATTC AAGTGGCTTT GCCCGAAAAT 
GTTCAGCCAG AAAACCTAGT TTTTTCTTGG TACAATCCCC AAGAAAAAAC CTGGGTGGCA 
TTGCCTGCTG TTTTTGATGC AGAGAGAAGC CTTATCATGG CTCGTATTTC CCACTTCTCC 
CGCTATATGG TGACAGGAAA AACAACTACG CCAACCATGG ATCCTCAACC AGCCAGAAAG 
ACTTTTGCTG ATTTAACCGG CTTTGACTGG GCCCGGGACG CCATTGAATC GTTGGCTGGT 
CAGGGGATTA TTAGCGGCGT ATCTGAGGAG CGTTTTGAAC CGGGCCGTAC CATTACCCGG 
GCCGAACTGG CTACCTTATT GGCTCGCATC AAAAATCTCT CTGCCAGTGA TATGTACCCC 
TTCTCAGATA TTTCTCCCAC CGACTGGTTT GCCTCTCCGG TAAGCGCTGC TGCTAAGGCT 
AAGATTGTCA GCGGGTATCC GGATGGTACC TTTGACCCGC ATCATCCGGT GACCCGGGAA 
GAGATGGCGG TGATGCTGGT GAGGGCTTTC CAATTGACCG GAGGGGAAAA ACCGGTGACC 
TTTAACGACC GGGAGACCAT TGGACCCTGG GCTTCCGAAA GTGTTGCGAC CATGTTGGAC 
CAGGGCGTAA TCAAGGGATA TGAAGATAAT ACCTTTCGAC CCAAAAACCC GGCTACCCGG 
GCAGAAGTCG CTGTGCTACT CCATCGTTTA GTATCTATGA AGTAG 

 

Protein sequence

MGNLFFNSSI GKRIVLLFMV CFLTNLLLPF SAFANEPTTA SGGELAGKAV EFIHEKYMAG 
ESLDGYTAYV LTLAGEDLGS DKWTKPYCPS AKQDLVKATD AITIGHELGL EKNSLITYLL 
VHENPDGSFG PYANEYGTKI ALEALALIKD DLDGALKERV EQAITKAVAF LKSRYPLSED 
YSNSGFAAFD ARTVVALKTA GEDLTQDGWV KNGISLQDKA VAEAVYAAEN ANDKSATELA 
KHLGALYALE PTHEKVSQLG DAIRSKASVT EEGQVYFGSG GDFGVFDQVA VLRALGETNQ 
LTGVDQVNAL TYLNEFQRDH DEWGTPAGKA YGTSYTPKDS ELTAQAVTAL SKFDSDVAGE 
AIDDALTYLK SVQDKDTAAL PVSGDSSTAA AELLIALKKQ GLTYDQYAGE NALWAKVPQA 
KSVGLNLLAM KGFEEAERVE KLTFLLHDQH SSQGFSNNLF GDVWAYLALG TEGQIDAIKD 
DARIFLLDRQ ISDGDNMGAW DSTYPDYPDF MATSQAVRSL TYLKGYATDA DVAASIKKGV 
DYLKEKQRND GSYQTGWDDA VVDTSEMILT MKRLNQDPRE LKSGEGKSPV DWLLEKSLNN 
DGSFGDSKNV FGATIALNAF HTLGFTPSSG GSTPGDGGNT PGVDTASVGV IVVGKTGSKL 
FGPSYVTVEK TGQWGMTAME ALHQTGLSYS DRDGFVTAIE GEANQGMTGW MYMVNGRTPM 
VMAKDQPVKD GDKVIWWYSL DINNPGPTWE TATDGSWSNQ PAVNSNIPSS VQEQVDLLPS 
SLQPTSSVAK TLEDIQKVLG IAGSTSVLGS LSDVKQAVAV VAPDKLMKGE EAQERQKKLQ 
ANRVEIEQQV EANKGAVVSD AGEEMALVIP ANALGASAQI TVREETPLPM SPSDINSSIQ 
GWEKLPEGFR AVSPVYHMGP EGLTFSEPVT VAIQVALPEN VQPENLVFSW YNPQEKTWVA 
LPAVFDAERS LIMARISHFS RYMVTGKTTT PTMDPQPARK TFADLTGFDW ARDAIESLAG 
QGIISGVSEE RFEPGRTITR AELATLLARI KNLSASDMYP FSDISPTDWF ASPVSAAAKA 
KIVSGYPDGT FDPHHPVTRE EMAVMLVRAF QLTGGEKPVT FNDRETIGPW ASESVATMLD 
QGVIKGYEDN TFRPKNPATR AEVAVLLHRL VSMK