| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2668 |
|---|
| Symbol | |
|---|
| ID | 4958635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2888350 |
|---|
| End bp | 2889228 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640181849 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001113999 |
|---|
| Protein GI | 134300503 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.314138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTATA TGTTAATGGT CTTCCTGGCC GGCTGCAGTT TTGGTTTGGT TTCAACAGTG
GTAAAGCTGG CCTATGGCAG TGGTTTACAG CCGGATGCAG TAATTTTTGC TCAGTTTTTT
TTAGGATGGG CTATTTTGGT AGCCCTTAGT TTGTTTGTGC CTCGCCATAA AATTGACCTT
AAAACCGGAC TCAAGCTAAT CATGGTTGGC ATAACCAATA GTTTAGCAGG AATATTATTC
TTTTTATCCC TTAAGACACT TCCTGCTTCC ATTGCCATTG TGATTATGTT TCAATTTACT
TGGATTGGTG TAATTATTGA AGCCATCGCC GATCGCAAAT GGCCTGGTAA AGAAAAAATC
ATCTCCCTGC CGTTTTTAAT AATGGGTATA TTATTGGCCG GTGGTGTATT TGGTAGCGAA
ATAAAACTAG ATATCATGGG AGTTATTTAT GCGTGTCTTA CAGCCCTAAC CTTTGCCTTT
TTCATTTTCT TTAGTGGCTG CGTGGCACCG AATCATCCGC CCATAAACCG AAGTGTATGG
ATTATTTCTG GTGCACTTTT ATTTACTTTT GTTTTATATC CGCCTAAATT TTTAATAACT
GGTGGTATAG AGGGCGGTTT ATTGGGGTAC GGTTTGGTCT TGGGTTTACT GGGGCCGGTT
ATCCCCACCT TGTTCCTAGC CAAAGGGGTA CCTCAAATTG GACCAGGCAT GGCAACCATT
CTTGCTTCCT CTGAGTTACC CGTAGCTGTG ATAGCATCGT CCATTATGCT GGGTGAATAC
GTATCACCAT TACAATGGTG TGGCGTACTT TTAATTTTGT TAGGTATTTG TTTACCTCAA
TTAAGTCAAT TGAAAAATCA AACAGGCAAA ACAACTTAG
|
|---|
| Protein sequence | MIYMLMVFLA GCSFGLVSTV VKLAYGSGLQ PDAVIFAQFF LGWAILVALS LFVPRHKIDL
KTGLKLIMVG ITNSLAGILF FLSLKTLPAS IAIVIMFQFT WIGVIIEAIA DRKWPGKEKI
ISLPFLIMGI LLAGGVFGSE IKLDIMGVIY ACLTALTFAF FIFFSGCVAP NHPPINRSVW
IISGALLFTF VLYPPKFLIT GGIEGGLLGY GLVLGLLGPV IPTLFLAKGV PQIGPGMATI
LASSELPVAV IASSIMLGEY VSPLQWCGVL LILLGICLPQ LSQLKNQTGK TT
|
|---|
| |