| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2650 |
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| Symbol | |
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| ID | 4958481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 2869221 |
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| End bp | 2871191 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640181831 |
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| Product | OPT family oligopeptide transporter |
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| Protein accession | YP_001113981 |
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| Protein GI | 134300485 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTAAAA AAGCAAGAGA TATCATTAAC CAGGACGTCG TAGAACAAAA AAGTGATAGT
TTGGAGGGAG CCTACGGAGG GATCTCCGGC AAAAAATATG TACCCTTTGT CTCCACACAA
AAGGCATTGG TTGAGTTTAC TGTCAGGTCC CTGGTTATTG GTGCTGTACT TTCGGTGCTT
TTTGGCGTAG CCAATACATA TCTTGGCTTA AAAGTTGGTC TAACAGTCAG TGCTTCTATC
CCCGCTGCGG TACTGGCCAC CGGACTCTAT AAGTTATTTT TCCGTAGCGG TAACATTTTA
GAGAGAAACA TCGTGCAAAC TGTGGCTTCC TCCGGTGAAA GTATTGCCGG GGGTATTATG
TTCACCTTGC CAGCTCTGTT TCTCTGGGGT ATGGATATGA AAGTAATGAC CGTGGTCATT
GCCTCGGTAC TGGGTGGTCT TATTGGTGTC TTGTTTTTTA TTCCCTTACG AAGATATCTA
ACCGTTGAAG AGCATGGAAA GCTCATCTAC CCAGAAGGTA TGGCCTGTGC AGAGGTGCTG
GTATCCGGTG AAAAGGGCGG TGCCGGAGCA GGTTTAGTGT TTGCAGGAAT TGCCGTTGGT
GGCGTATATA AGTTTTTCTC CAGCGGTTTG ATGGCTTGGC GCGAAAGCCC TGAGTGGAAA
CTCCCCTTCC TCTCCAACGG GCTTATAGGC ATTAATGCTC TGCCCTCACT GCTGGGGGTG
GGCTTTATCG TGGGTTTTGA TGTGGGGAAG TTTATGTTGG CAGGTGGACT GTTCGCCTGG
TTGGTTATTA TCCCTCTCAT CAGTTACTTC GGACAAGCAG TGCCCACTGC CATTTTCCCC
AGTGACGTTC CCATTGCCCA GATGGATGCC TGGGCCATAT GGAGTAAATA TGTACGCTAT
ATAGGTGCCG GAGCTGTGGC TGCCGGTGGT TTTATCTCCT TAGCAACCTC TGCTCCTACA
ATTTTTAAAT CCTTTCGGGC TGCCATGTCC GGCTTGGCGT CCAGCCAGGG AGGCGAAAGC
GAAAAACGTA CAGAAAAGGA TCTTTCTCTG GCCATCGTGT TAGGAGGCAC CCTGCTGGTG
GCCGCCATCA TTACCTTTAC ACCCATTGTT CCCGGTGGGG TTGTGGGTGC CCTTTCCGTT
TTGTTCTTCG GTTTCTTTTT TGCCGCGGTT TCCAGCCGAA TTGTTGGCAT CGTCGGTGTA
TCCAATAATC CTGTGTCCGG CATGACCATT GCAACGTTAT TGGTACTCAG TGCCATTGTA
AAAGGTTTGG GATTTTCCGG AGAAACTGGT ATGGTGGTGG CTATTGTACT GGGTTCCATT
GTTTGTGTGG CCATTGCGGT GGCCGGTGCC ACAGCCCAGA ACGCTAAGAC CACCTTTATT
TTAGGGGGCA CGCCTAAATA TGCACAGGTT GCCCAATATG TAGGTGTCAT TGCCAGTGCT
TATTTTGTTG GTGCCATTAT TGTTATGCTG CACGGGGCCT ATACAATGGG CTCTGCAGAT
CTGCCAGCGC CCCAAGCTAC ATTAATGTCA ATGGTAACCA AAGGTGTTAT TACCGGTACT
CTGCCCTGGG AGTTTGTGAT TATGGGACTG GTATTTGGGG TGGCCATATA TTTGATGGGT
CTGCCCATCC TTCCAGTGGC CCTTGGTCTT TACCTGCCGG TGCATTTAAG TATGGGTATT
CTCTTTGGGG GGGTTGTACG AATCCTAGTA GAAAAGGGCA TTGCTGCCCA GGATGAATTG
AAAGATAAAG TTGAGCGAGG TGTACTAATC TCTTCCGGAC TGATTGCCGG AGATGCCTTG
ATCGGTATTT TGATTGCCTT CTTTGCCTAT ATTGAATACA ATATAGCTTT CCTTAAGGGA
ACTGTTCTGG CAGCCAACAA CTGGTTTGCT TTGGCCATGT TCCTCGTAGT GGCCTGGTTT
ACCTACTGGT ATACAAATCG CAAGGATGTA CAGAAAGATT TAAATATCTA A
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| Protein sequence | MAKKARDIIN QDVVEQKSDS LEGAYGGISG KKYVPFVSTQ KALVEFTVRS LVIGAVLSVL
FGVANTYLGL KVGLTVSASI PAAVLATGLY KLFFRSGNIL ERNIVQTVAS SGESIAGGIM
FTLPALFLWG MDMKVMTVVI ASVLGGLIGV LFFIPLRRYL TVEEHGKLIY PEGMACAEVL
VSGEKGGAGA GLVFAGIAVG GVYKFFSSGL MAWRESPEWK LPFLSNGLIG INALPSLLGV
GFIVGFDVGK FMLAGGLFAW LVIIPLISYF GQAVPTAIFP SDVPIAQMDA WAIWSKYVRY
IGAGAVAAGG FISLATSAPT IFKSFRAAMS GLASSQGGES EKRTEKDLSL AIVLGGTLLV
AAIITFTPIV PGGVVGALSV LFFGFFFAAV SSRIVGIVGV SNNPVSGMTI ATLLVLSAIV
KGLGFSGETG MVVAIVLGSI VCVAIAVAGA TAQNAKTTFI LGGTPKYAQV AQYVGVIASA
YFVGAIIVML HGAYTMGSAD LPAPQATLMS MVTKGVITGT LPWEFVIMGL VFGVAIYLMG
LPILPVALGL YLPVHLSMGI LFGGVVRILV EKGIAAQDEL KDKVERGVLI SSGLIAGDAL
IGILIAFFAY IEYNIAFLKG TVLAANNWFA LAMFLVVAWF TYWYTNRKDV QKDLNI
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