| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2560 |
|---|
| Symbol | |
|---|
| ID | 4958022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2787453 |
|---|
| End bp | 2789168 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640181739 |
|---|
| Product | ATPase central domain-containing protein |
|---|
| Protein accession | YP_001113895 |
|---|
| Protein GI | 134300399 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1067] Predicted ATP-dependent protease |
|---|
| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease
[TIGR02902] ATP-dependent protease LonB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGAAC TTACCAGTCT TGGGGGTTTT CTCACCTTCA TACAGGTATT TTTTGCGGTG
GTAATTGGTC TGTACTTCTG GAATTTATTA AAGCAACAAC AAGGCAATAA AACTGCCGTA
GAAAAGGAAT CCCGTAAAGA GATGGAGAAA TTGCAACGGC TTAGGGCTAT TTCCCTAACA
GAACCGTTGG CAGAGAAAAC AAGACCCAAA AAGTTTAGTG AGATCATAGG GCAGGAAGAG
GGTTTAAAAT CCCTGAGGGC TGCTCTATGT GGACCCAACC CACAGCATGT TATTGTCTAT
GGCCCTCCTG GTGTCGGTAA AACTGCAGCA GCCAGACTGG TATTGGAAGA GGCAAAAAAG
GTACCTAGCT CACCCTTTAA GGAAAATGCA AAATTCATCG AGTTGGATGC CACCACGGCC
CGCTTTGATG AAAGGGGTAT TGCAGACCCA TTAATCGGTT CGGTGCATGA CCCCATCTAC
CAGGGAGCAG GCCCAATGGG CATGGCAGGA ATCCCACAAC CCAAGCCTGG GGCTGTCACA
AAGGCCCATG GAGGATTGCT TTTCATTGAT GAAATTGGGG AACTTCACCC TATTCAGATG
AACAAATTAT TAAAGGTTTT GGAAGATCGC AAGGTCTTTT TGGAAAGTGC CTACTACAGC
ACCGAAGACA GTAACATACC GACTCATATT CATGATATTT TCCAGAATGG ATTGCCGGCG
GATTTCCGTA TGGTCGGTGC AACCACCCGA ACACCAGATG AAATTCCGCC GGCCATACGT
TCCCGCTGCT TGGAAATTTT CTTCCGTCCG CTGCAACAGG ATGAGATAGA GAAGATTGCA
GATAATGCAG CACAAAAGAT TGGTTTTCCC CTAGAGAAAG GGGCCTTAGA TGTCATTAAA
CGGTATGCCA CAAATGGCAG GGAATCTGTA AATATTATTC AGATCGCTGG TGGTATTGCC
CTTACGGAAG GTAGGAAAGA AATTCTAGTA AGGGATATAG AGTGGGTTAT CCATAGCGGT
CAATACTCAC CACGACCCGA GCGGAAAATT AATCCTCAAC CCCAGATTGG TGTGGTGAAC
GGACTGGCAG TGTATGGTCC CAATATGGGG ATTGTCTCAG AAGTGGAAGC AACGGTTATC
CCCAATGTTG CGGGAACTGG GAAAATCACT GTTACTGGAG TAGTTGAAGA AGAAGAGATT
GGTGGCAACG GGAAAAAAGT ACGGCGCAAA AGTATGGCTC GTAGTTCAGT AGAAAATGTA
GTTACTGTAC TGCGGCGGGT TATGGATGTA AATCCACAAA ATTATGATAT CCATGTAAAT
TTCCTGGGCA GTGGTTTAGT GGATGGTCCC TCTGCTGGCG TTACCATAGC CACAGCCATT
TATTCAGCTA TCAAAGGGAT TGCTGTTGAC AATACCGTAG CCATGACCGG GGAGATATCC
ATTCGTGGCT TAGTAAAGCC CATTGGCGGC GTTGTGGCAA AGGTAGACGC GGCACGTCAG
GCCGGGGTTA AAAAGGTTCT CATCCCTAGG GAGAATTACC AAGAAATGTT TAAAAACATG
GAAGGTATTG AGGTAATCCC TGTGGATACC TTGGGAGATG TGATTACAGG GTCACTTATG
GGACAGTCAG AGAAAGAGCA ACAGTGGGAG CCATTAACTT CCAATCTAGA GCTTCCCGCT
GCAGCTTTTT TAGCACAGGA ATCTGCCAAA TCCTGA
|
|---|
| Protein sequence | MGELTSLGGF LTFIQVFFAV VIGLYFWNLL KQQQGNKTAV EKESRKEMEK LQRLRAISLT
EPLAEKTRPK KFSEIIGQEE GLKSLRAALC GPNPQHVIVY GPPGVGKTAA ARLVLEEAKK
VPSSPFKENA KFIELDATTA RFDERGIADP LIGSVHDPIY QGAGPMGMAG IPQPKPGAVT
KAHGGLLFID EIGELHPIQM NKLLKVLEDR KVFLESAYYS TEDSNIPTHI HDIFQNGLPA
DFRMVGATTR TPDEIPPAIR SRCLEIFFRP LQQDEIEKIA DNAAQKIGFP LEKGALDVIK
RYATNGRESV NIIQIAGGIA LTEGRKEILV RDIEWVIHSG QYSPRPERKI NPQPQIGVVN
GLAVYGPNMG IVSEVEATVI PNVAGTGKIT VTGVVEEEEI GGNGKKVRRK SMARSSVENV
VTVLRRVMDV NPQNYDIHVN FLGSGLVDGP SAGVTIATAI YSAIKGIAVD NTVAMTGEIS
IRGLVKPIGG VVAKVDAARQ AGVKKVLIPR ENYQEMFKNM EGIEVIPVDT LGDVITGSLM
GQSEKEQQWE PLTSNLELPA AAFLAQESAK S
|
|---|
| |