Gene Dred_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2549 
Symbol 
ID4955624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2772747 
End bp2773430 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content44% 
IMG OID640181728 
ProductDNA repair protein RadC 
Protein accessionYP_001113884 
Protein GI134300388 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTATC CCGTAATACG TGAATTGCCC CCGGAAATGC GCCCCAGAGA ACGTATGTTA 
AAAGAGGGCG CAGGGAGTCT CACCGAAATT GATTTATTAG CTATTATGCT GCGCACAGGT 
ACATCTAAAG TTTCTGTTTT GGAGTTAGCA GCAGAATTAT TTAGTCACTT TAAGGACTTA 
AGAGCACTTT CTCAAGCAAC AATTGAAGAA CTAAGTCAGA TTAAGGGAGT GGGACCTGTT 
AAGGCTGTTC AGGTAAAGGC AGCCTTAGAA CTGGGCCGTA GGTTGGCAGC GATGCCTGCT 
GAAACTAGGG TCATTATACG GTGTCCGGAA GATGTTTGTG GCTTGGTTAT GGAGGATCTA 
AGGGACTTGG ATCGGGAGCA CTTTTTAGCT CTCTTGCTTA ATACCAAAAA TCAGGTATTA 
GCCAGGGAAA CCATCTCAAT CGGCACACTA AATTCATCGG TTGTGCATCC CCGGGAACTG 
TTTAAAGTTG CTATACGACG CAGTGCTGCC TCAATGATCT TAGTACACAA CCATCCCAGT 
GGTGACCCGA CACCCAGCCG AGAAGACATT GTTTTAACCA AAAGATTGAT CGAGGCAGGA 
GAAATTATTG GGATAGATGT CCTAGACCAC ATTATTATTG GAGATAATAA GTTTACCAGT 
CTAAAGTCCA AAGGACTTAT CTGA
 
Protein sequence
MTYPVIRELP PEMRPRERML KEGAGSLTEI DLLAIMLRTG TSKVSVLELA AELFSHFKDL 
RALSQATIEE LSQIKGVGPV KAVQVKAALE LGRRLAAMPA ETRVIIRCPE DVCGLVMEDL 
RDLDREHFLA LLLNTKNQVL ARETISIGTL NSSVVHPREL FKVAIRRSAA SMILVHNHPS 
GDPTPSREDI VLTKRLIEAG EIIGIDVLDH IIIGDNKFTS LKSKGLI