Gene Dred_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2418 
Symbol 
ID4958163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2635175 
End bp2637013 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content44% 
IMG OID640181590 
Productflagellar hook-associated 2 domain-containing protein 
Protein accessionYP_001113753 
Protein GI134300257 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTA ACATGAGAAT CGGCGGCTTA GCCTCCGGTA TGGATATTGA CCAGATTGTA 
AAAGACTTAA TGAAAATACA GAATATGAAA ATGGATAAAT TAAAGCAAGA AAAGCAGATA
TTTGAATGGC AGCAAGAGGA CTATAGAACC ATCAATTCAA CCCTGCGAAG TTTCCGAGAT
AATCAGGTTT TTCAAATGAA ATTGCAATCC ACCTACTTAG CCAGAAACGC TACTTCCTCC
AATGAAAATA CCGTAAAGGC AACGGCTAGT TCCTTAGCCC ATGAAGGAAC CCACCGAATT
ACCGTTAAGA ATCTGGCCGA AGGGGCTTCC TTAACAAGCA GTGCCAAGAT AAGTGCCACA
GAAAATTTGG CCACCTTAAA TGACCAATTT GGCACCGCAC ACACAGATCC GCTGGACTTT
GTGGTTAACG ATGTAATTTT CCAGATGGAC CCGCAAACGG AAAGCATTTA TGACCTGGTG
GGTAGAATTA ATCAGCATTC CTCCGCCGGG GTGTCCCTAA ATACCACCCA GCGGGCCACT
GCCACAGAAG CCCAGGTACA AAAACTAAAG CTCGCAGACA GTGCCTTGGC AGAGGGGTTA
ACCATAACCA TTGGAGATAA AAAAGTTGCC CTCTGGGACA GTACAAATTC TCAATACGAA
TCGGAAAGCA TTGCTAAGTC CGCCCTGAAG GCCGATGTAT TATATGATAT TGCCAGCCTT
ACCACGGGAG ATGCCGTTGT TGACGCTATT AAGAGCGATA TAGATGATGG TACATTAGCT
ATCACTGGAG CAACCTTAAC CAAAACAGAT GTTGGAGAAC TAACCATTAC ATCAAATGAA
GTGGGTGCAG AAAAGGCAGT AACAGCAAAG GTAGCCGGGG GAAAAAGCTG GGATGTCCGG
GCCTCCTATG ATAGCACAGT GGATCGTTTC TTCCTATTTA CCAATAAAAC CGGTGAAGAC
CAAAAGCTGG AAGTGGTCAA CAATACCCTG GCACAACAAC TGAAGCTCAC GGATGCCGCG
ACCCCAACCG TCAATGCGAT ATCAAATGGC ACCAATGCCG ATGTAGTGAT TGATGGCATG
GAAATTACGG AATATAAAAG CAACGAATTC ACCCTAAACG GTGTTACCTA TAGGCTACAA
AATGCGGATC CCGCTGCAAC CACCATTATA CAGGTTCAAA CAGATAACGA TGCGGTATAC
AACTCCATTA AATCCTTTAT TGACGAATAC AACAAACTTA TGGATACCCT TGATACCAAG
CTTAACGAAA AACGTTATAA AGACTATACC TGGCCACTCA CAGAGGATCA ACAAGAGAAA
CTGACAGATA ACCAAATTGA CATGTGGAAG GAAAAGGCCC GTAGTGGTAT GTTGAGAAAT
GATAATACAC TTCGGGATAT TCGGGATAAA CTAAGAAGCA CCATGGGTGA ATTGTCTAAA
ATAGGGATCG TGACCACGTC GGACTATTTC TCCAGCAAGC TGGAGATTAA AGAAGATACT
TTGAAAAAGG CCATCCAGAA TGATCTGCAG GGTGTTATGG ATGTATTTAC CGGTAGTGGT
GACGGCGTTG ATGGTGTGGG ACAAAAACTT TCCGACCATG TTAGTTCCGG CATTTCCACC
ATTATCGAGA AAGCCGGTGC CAACGGTAAC AAAGCGGATG ATGACAGTTT TCTTGGCAAG
CGCATCGATA ATGTAAATGA TGATATTGAC AACTTGGAAG ACCGCTTAAA GCAAATTGAA
GACCGTTATT GGCGGCAATT CTCAGCCATG GAAGCGGCCA TCAACAAGTT AAACCAACAG
AGTTCCTGGC TAATGCAGCA ATTCGGAGGA GGGGCATAA
 
Protein sequence
MSSNMRIGGL ASGMDIDQIV KDLMKIQNMK MDKLKQEKQI FEWQQEDYRT INSTLRSFRD 
NQVFQMKLQS TYLARNATSS NENTVKATAS SLAHEGTHRI TVKNLAEGAS LTSSAKISAT
ENLATLNDQF GTAHTDPLDF VVNDVIFQMD PQTESIYDLV GRINQHSSAG VSLNTTQRAT
ATEAQVQKLK LADSALAEGL TITIGDKKVA LWDSTNSQYE SESIAKSALK ADVLYDIASL
TTGDAVVDAI KSDIDDGTLA ITGATLTKTD VGELTITSNE VGAEKAVTAK VAGGKSWDVR
ASYDSTVDRF FLFTNKTGED QKLEVVNNTL AQQLKLTDAA TPTVNAISNG TNADVVIDGM
EITEYKSNEF TLNGVTYRLQ NADPAATTII QVQTDNDAVY NSIKSFIDEY NKLMDTLDTK
LNEKRYKDYT WPLTEDQQEK LTDNQIDMWK EKARSGMLRN DNTLRDIRDK LRSTMGELSK
IGIVTTSDYF SSKLEIKEDT LKKAIQNDLQ GVMDVFTGSG DGVDGVGQKL SDHVSSGIST
IIEKAGANGN KADDDSFLGK RIDNVNDDID NLEDRLKQIE DRYWRQFSAM EAAINKLNQQ
SSWLMQQFGG GA