| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2293 |
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| Symbol | |
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| ID | 4957954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2506525 |
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| End bp | 2508873 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640181465 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001113628 |
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| Protein GI | 134300132 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATCGAA AGCTAAGGGA TAGGTTATTT CCATTACAAA TAACGAAACG CTTTTATCTT
GGTATGGCTT TTTTGATCAT TGTACCCATT TTAGTTATGG AAATTCTCGA TCAAATTAGC
TTTATGGAAG AAAGAAAAAT AATCAAAGAG AAGGAGCTTT TTGCCGTTGT TTGTCATTTA
AACCGCTCTT TGCAAGGTTC TTATGATGAT ATACTTAAAC AATACAATAT AGAACCTTCT
CCCCAAGCAA AGTTGTTAAT TCTCAACTCT GTTTTACAGC CAATAATTAA TCAAATTGCC
TTCTGTCACA CGAATCTTAT AATAGGTTAT TATTCCAGCG AATTGGATAG TATTGTGGCC
TCAAATCTAG ATTACCCCAC CGGCAAGCTT TATCCACTAC CCCACACGCT ACCCTATTTT
GATATTTATA AAACTGGCAA CCCGCAATAC TTCTATGATC AAGATTTTTT TCATAAAAAC
AGCCATGAAA CCCTTAGCCT GGTCTATCCC CTTCATCGGC AAGGCAAGCT GATTGGTCAT
GTGTGGGCCA GTCGAGATAT GGATAGTTTC TATCAAGAAG CCTTAGCCAG AAGGAAAAAC
ACTCTTCTGG CCGGTTTTAT CATGCTTTTT GGCAGCATAT TCTTATCCTG GATATTTTTT
ACTAGATTCA AAAGAGATTT AAACCATTTT GCCAATGCCA TCGGCACAAA TAACTTGAGG
ATTTCCAGTG ATTCTTTACC GGAATTAAAC CCCCTGGTGG AACTAATTTA TAAAAGAGAA
AATGAACTAA AAAGAGAACT GGAAATCAGT TCTTCCATTG CAGAGTTATC CAGTAAGGTT
ATTTCAACGG CTTCCTTCAA TGAAGTCACA GAACATATAT TAGACCAGGC CAGGAAATTT
ACCGACAGCA AACTGGGCTA TGTAGGGTGC CTTGACCCTA TGACAGGGTG TTTAACTATC
TCATGTCTGC CTAAAGGAAT AGGCGGGGAC ATACATAGTG GAAAAGAGGT ATTTATAAAA
TATAAAGGTC TATGGGGATG GGTGCTAAAG AATAAAAAAT CTCTCCTTTC AAATAATCCG
GAACAAGATT ACAGAGCCCA GGTTACTCTT CCAGGTCATG TTAAAATAAC CAGATTTATT
GCTGTACCTG CCATTATTGA CGATCAATTA GTTGGTCAAA TTGCTTTAGC TAATGCCAAA
AGGGATTATA CCCCGGGGGA TCTGGTGTTG GTAGAAAGAT TTGCACGTCT TTTAGTTATT
TTAATTCATC GGGAGCACAG GGAAGAAGCT TTACGTATGT CGGAGGACCG CTTTGCCAAA
GCATTTAACA CCAATCCCTG CATGGTATCT ATCACCACCC TTGATGAAGG TCGTTTTATT
GATGTCAACA AAAGTTTTTT ACAAACCCTG GGCTACGAAC GTGAGGATGT CATTGGACAT
ACGTCCCAGG AAATTGATAT TGGTATAAAG TCAAAAAGAA AGGAAGTTAT TAATAGCATT
AAACAAGGAA AACCCGTGCA CAATCTTGAG GTAACTTTTT ATGGAAGAGA AGGGAACAGG
ATGGTTGGGT TATATTCTGC CGAATTAATT AAATTGTCTG GGGAGTCTTG CCTTCTTTCG
GTGGTGAATG ATATTACCAA ACGTAAACAG TTAGAAAAAG AAATGATACG ACTGGATCGC
TTGAATATGG TAGGCGAGAT GGCTGCAGGC ATTGCCCACG AGGTAAGGAA TCCCTTAACT
ACGGTAAGGG GCTTCCTGCA AATGCTCGGG AAGAAAAATG ACAATGGTAA GCTTCAAGAA
TATTATGCAT TAATGATTGA GGAGCTTGAC CGGGCAAACA CAATTATCTC AGAGTTTTTA
TCCACTGCCC GAAACAAACC GGATAAGCTG GAGCTAGAAG ACCTTAACAC AATTATTGAC
ACCTTGTTCC CCTTAATCGC AGCTGACGCC ATGAATTCTG ATTGCAATGT GGTGAGGGAG
TTGACAAATA TTTCTCCAAT TTTACTGAAC CAAAAGGAAA TACGACAGCT TATTTTAAAT
CTTGCCCACA ACAGTTTAGA GGCCATGACA CCTGGTGGAA CCCTTACAAT CAAGACTTTT
ATGGTTGGAG AGGAGATTAT TTTGTCAATG GCCGATACGG GTAAAGGAAT TGAAACCGAA
ATATTGGATA AATTGGGAAC ACCGTTCTTT ACAACCAAAG AGAATGGCAC TGGTTTAGGG
CTGGCAGTTT GCTATGGAAT TGTTAGGCGA CATCATGCAT CCATAGAAAT TGATACAAGT
CCCAAGGGAA CAACATTCTA TATTAAATTT AAACAGTTTA AAGGTGTTGA CAATGAATAT
GCTGTTTGA
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| Protein sequence | MYRKLRDRLF PLQITKRFYL GMAFLIIVPI LVMEILDQIS FMEERKIIKE KELFAVVCHL
NRSLQGSYDD ILKQYNIEPS PQAKLLILNS VLQPIINQIA FCHTNLIIGY YSSELDSIVA
SNLDYPTGKL YPLPHTLPYF DIYKTGNPQY FYDQDFFHKN SHETLSLVYP LHRQGKLIGH
VWASRDMDSF YQEALARRKN TLLAGFIMLF GSIFLSWIFF TRFKRDLNHF ANAIGTNNLR
ISSDSLPELN PLVELIYKRE NELKRELEIS SSIAELSSKV ISTASFNEVT EHILDQARKF
TDSKLGYVGC LDPMTGCLTI SCLPKGIGGD IHSGKEVFIK YKGLWGWVLK NKKSLLSNNP
EQDYRAQVTL PGHVKITRFI AVPAIIDDQL VGQIALANAK RDYTPGDLVL VERFARLLVI
LIHREHREEA LRMSEDRFAK AFNTNPCMVS ITTLDEGRFI DVNKSFLQTL GYEREDVIGH
TSQEIDIGIK SKRKEVINSI KQGKPVHNLE VTFYGREGNR MVGLYSAELI KLSGESCLLS
VVNDITKRKQ LEKEMIRLDR LNMVGEMAAG IAHEVRNPLT TVRGFLQMLG KKNDNGKLQE
YYALMIEELD RANTIISEFL STARNKPDKL ELEDLNTIID TLFPLIAADA MNSDCNVVRE
LTNISPILLN QKEIRQLILN LAHNSLEAMT PGGTLTIKTF MVGEEIILSM ADTGKGIETE
ILDKLGTPFF TTKENGTGLG LAVCYGIVRR HHASIEIDTS PKGTTFYIKF KQFKGVDNEY
AV
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