Gene Dred_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2188 
Symbol 
ID4957893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2391137 
End bp2391859 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content36% 
IMG OID640181364 
ProductGntR domain-containing protein 
Protein accessionYP_001113528 
Protein GI134300032 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.030411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTA AGCCTATAAA AGCAAAAAAA GTTTATGAAG AAATTGTGCA ACAAATAAAA 
GAGATGATTA GCAAGGGAGA ACTTCAAGCA GGGGATAAAA TGATTCCAGA GAGGGAGTTA
GCGGAAAGAC TTCAGGTAGG TCGTTCTGCT GTTAGAGAAG CTTATCGTGC CCTGGAAGCC
ATTGGAATTA TTGAGATAAG GTCTGGAGAG GGTACGTTTG TTCGCAAATT AGGAAACAAA
CCTATGACTG ATATTATGTC ATTCGCTGTT ATCACTGGAA AAGATACTCT TTTTGAACTT
TTGGAATTAC GTAAAATTGT AGAAACAGAG GCTGCTTCTC TAGCTGCACA GCGAAGAACA
GAGGAAGATA TAAATAATAT CGAAAAATGG CTTAAGCAAA TGAAGCTAGA CATTGAAAAA
GGAAATTTAG GTGATATTTC CGATATAAAC TTTCATTATG CACTTACAGA TGCTGCTCAT
AATTCGTTAT TAACAAGACT GATGAATTCA ATATCTGAAA CCATGAAAAA AGAAATGGTA
ACAGTACGTT TAAATTTATA TGAAGCCCAT AGAACACCTT GGAAGCTCTA TCATCAGCAT
GAAGTGATCA CTGAGGCTAT AAAAAAAGGA GATGCGGAAG GGGCTCGCGC TGCAATGTTA
GATCATTTAG TCAATGCTGA GAGAGAATTA ATACAATATA AGAACAAAAG CAATAAAGTA
TAA
 
Protein sequence
MEFKPIKAKK VYEEIVQQIK EMISKGELQA GDKMIPEREL AERLQVGRSA VREAYRALEA 
IGIIEIRSGE GTFVRKLGNK PMTDIMSFAV ITGKDTLFEL LELRKIVETE AASLAAQRRT
EEDINNIEKW LKQMKLDIEK GNLGDISDIN FHYALTDAAH NSLLTRLMNS ISETMKKEMV
TVRLNLYEAH RTPWKLYHQH EVITEAIKKG DAEGARAAML DHLVNAEREL IQYKNKSNKV