| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2098 |
|---|
| Symbol | |
|---|
| ID | 4956055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 2295401 |
|---|
| End bp | 2296174 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640181267 |
|---|
| Product | type II secretory pathway ATPase ExeA |
|---|
| Protein accession | YP_001113440 |
|---|
| Protein GI | 134299944 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACATC GGCATGGTAA ATACAACAGA CATGCCTATA CTCCGGAGGA TCAGTCTCAT
ATTCCTATCT ATCGATTTAT CTGCCCCAAT CCCAATTGTA GAAAAACCAC TGCCCTACTT
CCGGCTTTTT TAAAAGAACA TCACCCAATA TCTTTTGATA TTCAGGAGAA GGTGATACGC
CAGCAAGCAG AAGGTAAGAC GTTGGTTCAA TTGTCAGGGG AACTGCTACG CCACTTAGGT
GAAGAGACCC CATTCTCCAT TACAAAAGCC AAGCGATTAT TTGATGAGGC TTTGATGGCC
CGGACGGCTC AAGGGGGTAA AGAACTAGTC ATAATATTAG ATGAAGCCCA GGATATTAGT
TCATCCCTGC TGTTAGAACT TAGATTCGCT CGAAATCAGC AAATGGACTC CTTATCCCTT
TTTACCCTTA TTTTAGTGGG GCAACCTGAA TTAAGGCGAA CACTGCGTAT GAATAAATTT
GAGGCAATTA CTCAGCGAAT TCAACTTCGA TATCATCTTA CAGGATTAAT GGCAGAAGAA
ACTGCAACGT ATATTTGCCA TCAAATGAAA ACCGCCAGTC TGACAACCCC TCTGTTTTCG
GACAGTGCCA TAAAACTAAT TCATACTGAA ACTAAGGGGA TACCCCGATT GATTAACAGT
CTTTGTAGTC AAGCCCTTTA TGATGCCAAG CGACGGAACA GTGACGTAAT TGAGGAAAGT
ATGATCGGTA GAATCCTAGC TGATGCAGAA CGCCAACGCG GTACAGTCGG ATAA
|
|---|
| Protein sequence | MLHRHGKYNR HAYTPEDQSH IPIYRFICPN PNCRKTTALL PAFLKEHHPI SFDIQEKVIR
QQAEGKTLVQ LSGELLRHLG EETPFSITKA KRLFDEALMA RTAQGGKELV IILDEAQDIS
SSLLLELRFA RNQQMDSLSL FTLILVGQPE LRRTLRMNKF EAITQRIQLR YHLTGLMAEE
TATYICHQMK TASLTTPLFS DSAIKLIHTE TKGIPRLINS LCSQALYDAK RRNSDVIEES
MIGRILADAE RQRGTVG
|
|---|
| |