Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2069 |
Symbol | rnc |
ID | 4956699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2267293 |
End bp | 2268033 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640181238 |
Product | ribonuclease III |
Protein accession | YP_001113411 |
Protein GI | 134299915 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00379668 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTAAAC AAGACGAGCA AGCTAATCGC CTGAAAACAC GTTTGGGTTT TAAGTGGCAT AATCCTACAC TGCTGATACA GGCACTAACG CATAGTTCTT GTGTTCATGA AAACAGGGGG CATGGTTTGT GTCATAATCA AAGATTAGAA TTTTTAGGGG ATGCAGTTTT AGAGCTGATT ATCAGTGAAC ACTTATATAA AATGTTCCCA GATCGAACTG AAGGCGAGCT AACGAAAATG AGGGCATCTT CAGTATGTGA GCCCTCCTTG GCAAAGGTAG CCCGGGGATT GGACCTGGGC CGTTGCCTGC GCATGGGGCG TGGAGAAGAA CGTTCCGGCG GCAGGGAGCG GCCATCCATC TTGGCTGATG CCTTTGAGGC ATTACTGGGT GCTATTTATT TGGATCAGGG GTTGGAAATT TCCAGACATT TTGTTTTAAA CTGCCTCAGT TCTATTATCG ACGATGTTGT GGCTGGAAGA TTGGATAGGG ATTATAAAAC AGAATTACAA GAAATACTGC AACAATCATC TCCAGACCCC TTAACCTACA CCATCATGGA TGAATCCGGC CCCGATCATG ACAAAACCTT TACAGCCGGG GTGATCTACA AAGGAAAGGT CATCGGTAAG GGGAGCGGTC ACTCTAAAAA AGAAGCTGAA CAACAGGCAG CAAAGGATGC CTTTCAGCAT CTTGAAGGCA TGGGAAAATC CGGCCATAAA TCAGCTGGAC CAATCCGATA A
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Protein sequence | MSKQDEQANR LKTRLGFKWH NPTLLIQALT HSSCVHENRG HGLCHNQRLE FLGDAVLELI ISEHLYKMFP DRTEGELTKM RASSVCEPSL AKVARGLDLG RCLRMGRGEE RSGGRERPSI LADAFEALLG AIYLDQGLEI SRHFVLNCLS SIIDDVVAGR LDRDYKTELQ EILQQSSPDP LTYTIMDESG PDHDKTFTAG VIYKGKVIGK GSGHSKKEAE QQAAKDAFQH LEGMGKSGHK SAGPIR
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