| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2005 |
|---|
| Symbol | |
|---|
| ID | 4956558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2203999 |
|---|
| End bp | 2205147 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640181172 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001113348 |
|---|
| Protein GI | 134299852 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2718] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02877] sporulation protein YhbH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCTATA ATTTTATTAT TACCAGAGAA GATTGGTCGC TTCACCGTAA AGGTGAAGTT
GACCAACACC GTCATCGGGA GAAGGTACGC GAAGCAATCA AAAAGAACCT GGCGGATATT
GTTAGTGAAG AAAGTATTAT TTTGTCAGAT GGGCGTAGGG TTGTTAAAGT ACCCATTCGC
TCATTGGATC AATATCGATT TCGCTATGAT GCCAGGAAGC AAAAACATGC AGGGCAAGGA
GATGGTAAAA GTAAAGTTGG CGACGTACTG GGGAGTGATC CTCAACAGTC TCCGGGTAAT
GGACCCGGAG CGGGGGAGGA AGCAGGCCAT GATTACTACG AAGCTGATGT AACCATTGAT
GAGATAGAAA AAATAGTTTT TGAAGATTTG GGACTGCCCA ATCTGAAAGA AAAAAAGAAT
AAACAATTGG CCTCAGAATC AATTGAATTT CGCGATGTCA GAAAGTATGG TATCCAAAGC
AATGTTGATC GGAAAAGGAC TATTTTGGAA GTCCTTAAAC GCAATGCCTT AAAGGGTAAC
CCGGGTATTC ATGGGATTAC GCCGGATGAT TTAAGATATA AAACATGGGA AGTTATACCA
AAATATGAGT CCAGTGCAGT GGTACTAGCG ATGATGGACA CCTCCGGATC TATGGGTCCC
TTTGAAAAAT ATATTGCCAG AAGCTTCTTC TTTTGGATGG TAAGATTTCT GCGTACTAAA
TACCAAAACG TAGAAATTGT TTTTCTAGCC CATCATACCG AAGCCAAAGA AGTAAGCGAA
GATGAATTCT TTACCAAAGG GGAAAGCGGG GGTACGCGTT GTTCTTCGGT TTATCAACTT
GCCTTAGACC TCATTAATAC TCGATATCCT AAAGAAGATT ACAATATTTA TGCCTTTCAC
TTCTCAGATG GCGATAACCT TTCCAGTGAT AATGAAAAAT GCATACGCTT AATTGAAGAA
CTGTTAAACA AATGCAATTT GGTTGGTTAT GGAGAAATAG AAGGTCCCTA TTACTATACC
AGTACGCTTA ACTCATCCCT TAAAAAAATT AATAGCCCGT CCTTTGTTAG TGTAACAATT
CGGGATAAAA CAGGGGTATA TCCAGCACTT AAAGCCTTTT TCAAAAAACC CGACCAAGGG
GGAGGGTAG
|
|---|
| Protein sequence | MTYNFIITRE DWSLHRKGEV DQHRHREKVR EAIKKNLADI VSEESIILSD GRRVVKVPIR
SLDQYRFRYD ARKQKHAGQG DGKSKVGDVL GSDPQQSPGN GPGAGEEAGH DYYEADVTID
EIEKIVFEDL GLPNLKEKKN KQLASESIEF RDVRKYGIQS NVDRKRTILE VLKRNALKGN
PGIHGITPDD LRYKTWEVIP KYESSAVVLA MMDTSGSMGP FEKYIARSFF FWMVRFLRTK
YQNVEIVFLA HHTEAKEVSE DEFFTKGESG GTRCSSVYQL ALDLINTRYP KEDYNIYAFH
FSDGDNLSSD NEKCIRLIEE LLNKCNLVGY GEIEGPYYYT STLNSSLKKI NSPSFVSVTI
RDKTGVYPAL KAFFKKPDQG GG
|
|---|
| |