Gene Dred_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1940 
Symbol 
ID4956272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2131440 
End bp2132666 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content43% 
IMG OID640181108 
Productaspartate kinase I 
Protein accessionYP_001113284 
Protein GI134299788 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.604323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTTA TTATCCAAAA ATTTGGTGGA ACTTCTCTGG TTACCCAGGA ACTTAGGGAG 
CTAGTAGCAA ACAAAATTAT TGCTGCTGTA GATGAGGGGT TTTCACCGGT TGTTGTGGTA
TCTGCCATTG GTCGAGCGGG TGAACCCTAT GCCACAGATA CGTTACTCAA TTTTGCATTA
TCCATAAACC GTGACATTCC ACCCAGAGAA ATGGATATGT TAATGTCCTG TGGTGAGATT
ATATCTGGGG TAGCAATGGC TAATACACTC CAGCGCATGG GACATCAGGC AGTTTTATTA
ACAGGGGCTC AAGCGGGTAT CATAACAGAT GATAATTTCA ATGATGCACG GATTATTCGA
GTTGAGCCTC AAAATGTTAT TAAGCATGTG GAACAAGGGA AAATTGTTAT AGTAACAGGG
TTTCAAGGCA TCTGTCAAGG TGGCGACATA ACGACCCTAG GCCGCGGTGG CAGTGATACC
ACAGCATCTG CATTGGGAGT AGCCCTCAAT GCAGAGTATA TTGATATCTA TACAGATGTG
GAAGGTATTA TGACAGCGGA CCCCCGGATT GTGGAGGACG CAAGGATTTT AGATTCAGTA
ACTTATAATG AAATATGCCA GCTGGCCCAT GAAGGAGCAA AGGTTATTCA CCCTAGGGCA
GTGGAAATAG CAATGCAAAA AAATATCCCT CTTCGTGTTC GATCTACCTT TTTGGATTCC
CCAGGAACCC TGGTGACCAG TCATCATGGA GTTTATGGAA CCATAGATAT TACAAGGGAT
CGATTGGCAT GTGGTGTTAC CCATATTGCA GGGGTTACAC AGTTAAAAAT AATTGCCAAG
GATATTGCAG TGGAAGATCC AGCATTGCGA ATATTCCGGG CACTGGCCTT AGCAGATATC
AGTATAGATT TTATTAATGT CAGTCCAGAG TTAATAATGT TAACAGTGAA GGATGAAGTT
GCAAAGAAGG CTGTTGATGT ATTGGAAAAT CTAAGTGTTT TTCCGCAAGT GAAACCAAAT
TGTGCCAAAG TATCTACGGT TGGCGCAGGG ATGACGGGGG TTCCTGGTGT TATGGCCAGC
ATTATTCAGG CATTGACAGA AGAAGGGGTT GAAATACTGC AGTCCTCCGA CTCCCATACA
ACAATCTGGG TCTTAGTTGA AAAGGAAAAC ATGAAGAAAG CCATACGTGC CTTGCATCGA
AAGTTTAAGT TAGGTCAAAG GGAATAA
 
Protein sequence
MRFIIQKFGG TSLVTQELRE LVANKIIAAV DEGFSPVVVV SAIGRAGEPY ATDTLLNFAL 
SINRDIPPRE MDMLMSCGEI ISGVAMANTL QRMGHQAVLL TGAQAGIITD DNFNDARIIR
VEPQNVIKHV EQGKIVIVTG FQGICQGGDI TTLGRGGSDT TASALGVALN AEYIDIYTDV
EGIMTADPRI VEDARILDSV TYNEICQLAH EGAKVIHPRA VEIAMQKNIP LRVRSTFLDS
PGTLVTSHHG VYGTIDITRD RLACGVTHIA GVTQLKIIAK DIAVEDPALR IFRALALADI
SIDFINVSPE LIMLTVKDEV AKKAVDVLEN LSVFPQVKPN CAKVSTVGAG MTGVPGVMAS
IIQALTEEGV EILQSSDSHT TIWVLVEKEN MKKAIRALHR KFKLGQRE