Gene Dred_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1892 
Symbol 
ID4958165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2080037 
End bp2081161 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content44% 
IMG OID640181063 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001113239 
Protein GI134299743 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTTG ATATTACTGT AGGGAAGGAA GCCATCAAGC GGGCAGGAAT TGATCCATCC 
ATGGTTGATG AAATTACCCT GGGGCAGGTT TATCCTCATA TGCAAGGCTC GTTGCCAGCA
CGATGGGTAG GAATGGCCTG CGGACTAGAT GTTAAGAGTA GTGCAGTTAA TGTTAACCAA
AATTGTACCT CTGGTATGCG GGCCCTTGAA ATTGCCGCTC ATAATATCAT GCTTGGTAAT
ACAGACATTG CTTTGGTGGT AGGTACAGAA AGTATGACCA ACGTTCCTTA TTTGCTCCCA
AATGCAAGGA TGGGTTACAG GATGAATGCA CAAACTGTTG AGGATGGCCT GATTCGTGAT
GCTTTATTCT GCCCTTTTAC GGGTGCTCAT ATGGCCATAA CCGCAGAAAA TGTTGCCGAA
AAATATGGAA TTACCCGCGA TGAATGTGAC CAACTGGCCC TTATTAGTCA CCAACGTGCC
AGCAAAGCAG TTGAAGAGGG AACTTTTAAA CGAGAGGTAG TGCCGGTAGA GCTTAAAGGA
AAAAAAGGAC AGGTAACTTA TTTTGAAAAA GATGAGCATT TAATAGCTGA TGCCAATCTT
GAAGCAATGA GTAAATTACC CCCGGTTTTT AAAAAAGGAG GAACAGTTAC CGCCGCCAAT
GCTTCTGGTA TCAATGATGG AGCAGCAGCA ACTATCCTAA TGTCTAAGGA GAAAGCAAGG
GAATTGGGTA TCAAGCCGCT TTTAAGATTA GTCAACATTT GCAGTGAGGG AATAGAACCT
ACAGTAATGG GATTGGGTCC AGCAGTGGCT ATTCCTAAAG TCCTTAAAAA GGCTAACCTG
AACTTTGAAG ATATAGAGTA TTGGGAAATT AACGAGGCCT TTGCTGCTCA GTTCTTGGGG
GTAGGCAGGA TGCTAAAAGA AGATTATGGC ATGGAATTAA CATTGGATAA AGTCAACCAT
AATGGCTCTG GAATCGCTCT GGGACACCCG GTTGGATGTA CCGGTCTACG TCTAATAGTA
TCTTTATACT ATGAAATGGA ACGCCTGGGA CTGACTCTGG GTGGAGCTTC CCTGTGTGTT
GGAGATGGAC CAGCGATGGC TTCCCTATGG AGCAGAGAAA TATAG
 
Protein sequence
MGVDITVGKE AIKRAGIDPS MVDEITLGQV YPHMQGSLPA RWVGMACGLD VKSSAVNVNQ 
NCTSGMRALE IAAHNIMLGN TDIALVVGTE SMTNVPYLLP NARMGYRMNA QTVEDGLIRD
ALFCPFTGAH MAITAENVAE KYGITRDECD QLALISHQRA SKAVEEGTFK REVVPVELKG
KKGQVTYFEK DEHLIADANL EAMSKLPPVF KKGGTVTAAN ASGINDGAAA TILMSKEKAR
ELGIKPLLRL VNICSEGIEP TVMGLGPAVA IPKVLKKANL NFEDIEYWEI NEAFAAQFLG
VGRMLKEDYG MELTLDKVNH NGSGIALGHP VGCTGLRLIV SLYYEMERLG LTLGGASLCV
GDGPAMASLW SREI