| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1839 |
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| Symbol | |
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| ID | 4955651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 2017507 |
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| End bp | 2018949 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640181013 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001113189 |
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| Protein GI | 134299693 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAAA TTGTCACAAA ATCTTCTTCA ACAGTTAAAT CGCCATCAGA AACAAGCATA
GAAGAGGGTA ATTCTCAAGG GCAACATTTA GATAGCCAAC CTGTATGGCG CTCAATGCTT
GTTTTTCTCG TGCCGCTGAT TCTTAGTAAT ATACTACAGT CAGTGGGACA ACTGGTTGGT
ACTATTGTTG TAGGCAGATG GCTCGGAGTA AACGCCTTAG CCGCAATTTC AGCCTTCTTT
CCTCTATTCT TTTTGCTCGT TTCTTTCACC ATTGGCATAG GGGCTGGTAG CTCAATCCTG
ATCGGGCAAG CCTATGGTGC ACGTAACGAA GAGAGGATGA AGGCCGTCGT CGGGACAACA
CTCACATTTA CCTTCCTACT TGGCCTGACA CTGACCTTAA TAGGCGGCAT CTTTACCCGA
GATATACTGA ATTTAATGGG AACCCCAGCA AATATCATCG ACACCAGCGT CCACTATGCA
CGAATCTTGT TCTGGTCTAT GCCAGTCATG TTTTTATATT TTGCCTACAC AACTTTTATG
CGAGGTACAG GTGATTCCAA AACTCCCTTC TACACATTGA TCGTCAGCAC CATACTGGAC
CTGGGCCTGT TACCATTTTT GATCTTTGGG TGGTTGGGAG TGCCAAAGTT TGGCCTATAT
GGTGCAGCCT ACGCATCGGT AGCATCGACG GCGATTACAT TTGTTTTAAT GCTGATTTAT
CTTAACAAAA CCAACCATCC ATTACAATTT GATGCTTCCG TAAGGCAGCA CCTTAGAATA
GATTTTGGTT TATTAAAGTT GCTACTCCGC CTCGGCATTC CATCAAGTAT TAACATGATA
CTAGTATCGC TTTCAGAAAT AGCGGTTATT ACATTTGTAA ACCGATTTGG TTCCGATGCC
ACCGCAGCTT ATGGCGCTGT AAATCAGGTC GTAAGTTATG TACAGATGCC AGCGATAAGT
CTGGGCATTG CCGTATCCAT CTTCGCCTCA CAGTCCATCG GGGCAAATCG GCTTGATCGG
CTAAAAGATG TGATTAGAGC CGGGGTTTTA CTCAACTACT TTATCGGCGG AATAATCGTT
TTATTGGTTT ATCTGTTTTC CCAAGATATT TTATCCTGGT TTTTAACAAG TAAGAACACT
TTGCAGATTG CCCATAGTCT CCTTATTATT ACTCTATGGA GCTATTTAGT CTTTGGACAC
GCTCAGATTA TTACTGCTAC CATGCGTGCC AGCGGAACTG TCCTCTGGCC AACAGTGTTC
AGCGTGCTTT CTATATGGTG TGTCGAGGTG CCAGTGGCCT ACGGCCTGTC CAATTTTACT
AGCCTTGGCA TTCAGGGAAT ATGGATAGGT TATCCTGTGG CATTCCTTGT CAATCTAGTT
TTACAATATA CGTACTATAG GTGGTCATGG AATAAGAAGC GTATTACAAG ACTTATCCAT
TAA
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| Protein sequence | MDEIVTKSSS TVKSPSETSI EEGNSQGQHL DSQPVWRSML VFLVPLILSN ILQSVGQLVG
TIVVGRWLGV NALAAISAFF PLFFLLVSFT IGIGAGSSIL IGQAYGARNE ERMKAVVGTT
LTFTFLLGLT LTLIGGIFTR DILNLMGTPA NIIDTSVHYA RILFWSMPVM FLYFAYTTFM
RGTGDSKTPF YTLIVSTILD LGLLPFLIFG WLGVPKFGLY GAAYASVAST AITFVLMLIY
LNKTNHPLQF DASVRQHLRI DFGLLKLLLR LGIPSSINMI LVSLSEIAVI TFVNRFGSDA
TAAYGAVNQV VSYVQMPAIS LGIAVSIFAS QSIGANRLDR LKDVIRAGVL LNYFIGGIIV
LLVYLFSQDI LSWFLTSKNT LQIAHSLLII TLWSYLVFGH AQIITATMRA SGTVLWPTVF
SVLSIWCVEV PVAYGLSNFT SLGIQGIWIG YPVAFLVNLV LQYTYYRWSW NKKRITRLIH
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