| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1798 |
|---|
| Symbol | |
|---|
| ID | 4957005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1973353 |
|---|
| End bp | 1974429 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640180972 |
|---|
| Product | 6-phosphofructokinase |
|---|
| Protein accession | YP_001113148 |
|---|
| Protein GI | 134299652 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | [TIGR02483] phosphofructokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAC GTGTAGCTGT ACTTACCGGA GGGGGTGATG CCCCGGGCCT TAACGCAGTT
ATCCGAGCCA TCGTCAAAAC TGCCATTCGG GAATATGGTG TAGAAGTTAT TGGTTTTCGC
GACGGGTTTA AAGGAGTTAT GGAAAAACTT GTGACTCCAC TCTCAGAGCG GGAGGTGTCT
GGTATATTAC CCCGAGGTGG CACCATTCTT GGTACCACGA ACCGCGATAA CCCCTTTCAT
TTCCAAGTTG GCGAAGGAGT ATATGAAGAT CGATCCGACC AATGCATCGA TATTATTAAT
CAGTATGCAG ATGCATTAAT TATCATAGGT GGAGATGGAT CTCTGTCCAT TGGCTTTGAG
CTAGCCCAAA AGGGATTAAA TATTGTGGGA TGTCCTAAGA CCATTGATAA TGATTTAGCA
GTGGGAGAAG CCAAGACCTT TGGATTTGAC ACCGCCTATG CCTTTGCCAC AGAAGCCCTG
GACAGATTAC ACTCCACAGC AGAATCCCAC CACCGTATTA TTGTATTGGA AGTCATGGGC
CGCTATGCAG GCCATATAGC ACTGCATTCG GGTATTGCAG GGGGAGCTGA TATCATCCTG
CTTCCAGAAA TCCCCTTTAG CTACGACAAT ATTATAAAGA AATTAGAAGA GCGACAGAAT
CAGAATAAGC GGTTTAGTCT AGTGGTGGTG GCAGAAGGGG CTAAAACTCG GGAAGGGGAA
CTGGTGGTAC AAAATTATGT ATCCCAAAGT CCAGATCCCA TTCGTCTGGG GGGCATTGGA
GAAGTTGTGG CTAAGGAGTT GGAGAGGCTA ACCGGCATTG AATGTCGTGT TACAGTACTG
GGACATTTGC AGAGGGGAGG CAGTCCAACC CCCCATGATC GCATTCTTGC CACCCGATAT
GGCGTTGCTG CCATGGACCT TGTTGCTCAG GGCAAATTTG GTTCAGTGGT AGCGCTGGCC
GGTGATAGTC TAAAACCTAT CCCCTTAGCT GAAGTTGCCA AGGGCATAAG AAAGGTTAAT
ACCGCAGGTG ATTTACTGAA GTGTGCCAAA AAAATTGGTA TATCCTTTGG TGATTAG
|
|---|
| Protein sequence | MIKRVAVLTG GGDAPGLNAV IRAIVKTAIR EYGVEVIGFR DGFKGVMEKL VTPLSEREVS
GILPRGGTIL GTTNRDNPFH FQVGEGVYED RSDQCIDIIN QYADALIIIG GDGSLSIGFE
LAQKGLNIVG CPKTIDNDLA VGEAKTFGFD TAYAFATEAL DRLHSTAESH HRIIVLEVMG
RYAGHIALHS GIAGGADIIL LPEIPFSYDN IIKKLEERQN QNKRFSLVVV AEGAKTREGE
LVVQNYVSQS PDPIRLGGIG EVVAKELERL TGIECRVTVL GHLQRGGSPT PHDRILATRY
GVAAMDLVAQ GKFGSVVALA GDSLKPIPLA EVAKGIRKVN TAGDLLKCAK KIGISFGD
|
|---|
| |