Gene Dred_1771 details

Gene Information

• Locus tag: Dred_1771
• ID: 4955414
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1937666
• End bp: 1938112
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640180944
• Product: cobalamin B12-binding domain-containing protein
• Protein accession: YP_001113121
• Protein GI: 134299625
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
• TIGRFAM ID: [TIGR00640] methylmalonyl-CoA mutase C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.379199
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAATC AGGGAATCAA GGTTTTGCTA GCGAAAGTAG GACTGGATAA TCAAGATAAG 
GAAATTCGCT TATTAGCCCG AAGTTTGAAA AATCAAGGTG GCATAAAAGT TATTTATACA 
GGCTTGTATT GTACTCTGGA AGAAATCGTT CAATCAGCAT TACAAGAAAA GGTTGATCTA 
GTTGGGGTGA GTGTGCACAA CGGTTCTCAC AATGAAATAT TTCCCCGCCT ACGTGGATTA 
CTTGATGCCA AGAAAGCTAG CGATATCTTG GTTTTCGGAG GAGGCATGAT TCCTGAGAAA 
CATAGGCAAG AACTAAAAGC TTCAGGAGTA GTCGATGAGA TATTTGGACC TAGTACCTCC 
ATCAGTATAA TTGTAGATTG GATTTATAAA CAATGGCTGC CCAGAAGGAA AAAAGGCATC 
TTAAATCTTT CTAGCATGGT TGATTAA 

 

Protein sequence

MDNQGIKVLL AKVGLDNQDK EIRLLARSLK NQGGIKVIYT GLYCTLEEIV QSALQEKVDL 
VGVSVHNGSH NEIFPRLRGL LDAKKASDIL VFGGGMIPEK HRQELKASGV VDEIFGPSTS 
ISIIVDWIYK QWLPRRKKGI LNLSSMVD