| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1670 |
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| Symbol | secF |
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| ID | 4958030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1825839 |
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| End bp | 1826717 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640180846 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001113023 |
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| Protein GI | 134299527 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00270917 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCATA TTATAAAAAA ACGCAAAATA TATTATATTA TCTCCCTGGC CATTATCCTC
ATCGGGATGG TTTCACTGCT AACCAAGGGC TTAAACCTTG GCATCGATTT CACTGGAGGC
AACATCGTTG AGTTGCAGTT TAAAAAATCG GTAACAGCAG AGTCTGTACG TGCTGTATTA
GCTGAGTACA AGCTAGCAGA TAGCAAAGTA CAAACCAGTG GAGAAAATAC CTATTTAATT
CGTACCCATG CTTTAACACA GGAAGAAAGT GATAAAGCCT TTAACGCAAT AAGTGAAAAA
TTGGGTGGGG CCACTGTTCT CAGAAATGAG TTGGTGGGTC CTGTGATTGG TAAGGAATTA
ACTAGGCAAG CAATCTTGGC TCTGGCCATT GCTTCTGTAT TAATGATTCT CTATATTACC
TGGCGTTTTG AATTTCTCCA GGGTATATCT GCCATTGGTG CACTTCTACA CGATGTGTTA
GTAATGGTGG GTATGGCATC CCTGTTGCAA ATTGAAATTG ACAGCACCTT TGTGGCGGCA
GTTCTAACCA TCATTGGTTA TTCCATTAAC GATACCATTG TTATCTTTGA CCGAATTCGG
GAAAACATGA GGAAAAGCCG TAAAGAGGAT CTGGCGGATT TGGTCAACAA ATCCCTTTGG
CAAACCATGG CCCGGTCCAT TAACACGGTG TTAACGGTGG TCTTTGTGCT GGTTGCATTA
CTGTTATTTG GTGGAAGCAC CATTCATAAC TTTGTGTCGT TACTGTTGAT TGGTGTTATT
AGTGGTGCCT ACTCTTCCAT CTTTAACGCC AGCCCGGTTT GGTTTGACTT GAGACGGATT
CAGAAGGAAC GCAAGGCTTC TGCAAAAGCC ACTGCATAA
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| Protein sequence | MFHIIKKRKI YYIISLAIIL IGMVSLLTKG LNLGIDFTGG NIVELQFKKS VTAESVRAVL
AEYKLADSKV QTSGENTYLI RTHALTQEES DKAFNAISEK LGGATVLRNE LVGPVIGKEL
TRQAILALAI ASVLMILYIT WRFEFLQGIS AIGALLHDVL VMVGMASLLQ IEIDSTFVAA
VLTIIGYSIN DTIVIFDRIR ENMRKSRKED LADLVNKSLW QTMARSINTV LTVVFVLVAL
LLFGGSTIHN FVSLLLIGVI SGAYSSIFNA SPVWFDLRRI QKERKASAKA TA
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