| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1632 |
|---|
| Symbol | |
|---|
| ID | 4956363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1776786 |
|---|
| End bp | 1777583 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640180808 |
|---|
| Product | CRISPR-associated Cas family protein |
|---|
| Protein accession | YP_001112985 |
|---|
| Protein GI | 134299489 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5551] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTACGG CCTTACAGGT TGAACTAGAA GCGGTTGCTG ATGGGGCTTT GCCCGTCGGC
AATGCATTAT ATATTCATGG TCTTTTCTTT CGCTTGCTAC AAGAGGTTAA TATCAATATT
AGTGATTACT TGCACAATGT ACAGAGTATT AAGCCGTATA CGTTATCTAC CTTACAAGGA
GTTAAGCAGA ACAAAGGTTG GTGTTCTGTC TGCCAGGGAA AAAAATATCG TTTTAGAGCA
ACTTTTATGC AGGAAGAAGT TTTTTTGAAT TTTTATGAAG TTGTCTACTC GTACTATGTA
AATAAAAAAA CAGTTAAAAT AGGCAATATA GATTTTCTTG TTTCGAAGAT TGATCTGGAA
AGAACGAATA AATTTGAAGA TCTAATTGGT AATGAAGTAA ACCTTCAAAA ATTTGAAATA
GATTTTTTAT CCCCAACAAA TTTTAGAGTT AATGGCATAC AGCATATCTT TCCAGATAGT
CACACAGTTT TTAAAAGCTA TAAAAATCGC TGGAATACAT TTTGTCCCAA TCATCTTATT
TTTCCAGAAC ATGATTTATC CTTAATATAT GATGGTTGCT ATTCTGTTAG ATACAACTTG
CACACAGAAA TTATTGAGAT GGGGAAATAT AAGATGGTAG GATTTAAGGG TACTTGTCGG
TATGAGATTA ACCCAAAATT AAGCGGTGAA CTTAGAGATA GGGCTTCAGG TCTTTTAAAA
TTCGCTAGAT ACTGTGGCAC TGGTTATAAA ACCACAATGG GCTTAGGACA AACAAAGGTA
TCTTTTATGA TAAAGTAA
|
|---|
| Protein sequence | MLTALQVELE AVADGALPVG NALYIHGLFF RLLQEVNINI SDYLHNVQSI KPYTLSTLQG
VKQNKGWCSV CQGKKYRFRA TFMQEEVFLN FYEVVYSYYV NKKTVKIGNI DFLVSKIDLE
RTNKFEDLIG NEVNLQKFEI DFLSPTNFRV NGIQHIFPDS HTVFKSYKNR WNTFCPNHLI
FPEHDLSLIY DGCYSVRYNL HTEIIEMGKY KMVGFKGTCR YEINPKLSGE LRDRASGLLK
FARYCGTGYK TTMGLGQTKV SFMIK
|
|---|
| |