Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1589 |
Symbol | |
ID | 4955238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1729646 |
End bp | 1730755 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640180763 |
Product | ABC-2 type transporter |
Protein accession | YP_001112942 |
Protein GI | 134299446 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.548124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAA TTTTATCCAT CTTATATAAG GAATTTTTAC AAATGAAAAG AGATCGCTTA ACCATTGGGT TAATTTTCAT GCTTCCCCTG GTGCAGCTGC TGCTTTTTGG CTATGCTATC CAAACTGAAG TAAAACATAT ACCCACAGTG GTTTTTGATC AATCCTTATC TCCGGAGAGT CGTGAACTGC TGGATTCCTT CAAGGTATCA GGTTACTTTG AGGTTACAGA GATGGCGGGA AGCTATACAG AAGTTACCGA CATGATCGAT AAAGGTACTG TTAAGGTGGG GGTGATTTTC CCGCCTGATT TTGCTGGGAA TGTGAGAAGG GGAGATACCG CCCAGGTCCA AGTACTAGTA GATGCCACAG ATAGTATGGT TTCTAATTCT GCCATCGCCA CTGCTAATGC CATTGGACTA ATTAAATCCC AGAATGTTAT TATTGAAAAG GTTGGTCATT ATCAACCTCC CTACGATGTG CGAGTTCGGC CTTGGTATAA TCCAGATGGA ATTACGGCCT ATTACATGGT ACCGGCTATT TTGGGAATCA TTGTAACAAT GACAATGGTA ATGATGACAT CAATGGGGAT TGTTCGTGAG CGGGAGCGGG GAACTCTGGA GCAGCTTATT GTTACCCCCA TTAAATCCTA TGAATTAATG ATTGGAAAGG TTATTCCATA CGTTGCCCTG GGTTATCTGC AAATTACGGT AGCATTGCTG GTGGGAGTGA TTATCTTTGA TGTTCCCATC CGGGGCAGCT TACTGCAACT GTATCTTTTA ACACTGTTCT TTATTACTGC GTCCTTGGGT ATTGGTGTAC TGATATCTAA CATCGCCAAG TCACAAATGC AAGCCATGCA AATGTCATTT TTCGTTCTAT TGCCTAGTAT TTTGCTATCG GGATTTATGT TTCCAAGGGA TGCTATGCCT GTTGTGATAA AATATATAAG TAACCTGATC CCTCTAACTT ATTATTTAAC CATTATTCGG GGGATTGTCC TGAAGGGGAT AGGATTTTCT TATCTGGTAC CCCAAGTCAT AGCATTGTTT ACTTTCACAG TAGTATTGAT GACTATTAGT ATCTTAAAGT TTAAGAAGAA GATTGTCTAA
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Protein sequence | MSRILSILYK EFLQMKRDRL TIGLIFMLPL VQLLLFGYAI QTEVKHIPTV VFDQSLSPES RELLDSFKVS GYFEVTEMAG SYTEVTDMID KGTVKVGVIF PPDFAGNVRR GDTAQVQVLV DATDSMVSNS AIATANAIGL IKSQNVIIEK VGHYQPPYDV RVRPWYNPDG ITAYYMVPAI LGIIVTMTMV MMTSMGIVRE RERGTLEQLI VTPIKSYELM IGKVIPYVAL GYLQITVALL VGVIIFDVPI RGSLLQLYLL TLFFITASLG IGVLISNIAK SQMQAMQMSF FVLLPSILLS GFMFPRDAMP VVIKYISNLI PLTYYLTIIR GIVLKGIGFS YLVPQVIALF TFTVVLMTIS ILKFKKKIV
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