Gene Dred_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1589 
Symbol 
ID4955238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1729646 
End bp1730755 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content41% 
IMG OID640180763 
ProductABC-2 type transporter 
Protein accessionYP_001112942 
Protein GI134299446 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.548124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGAA TTTTATCCAT CTTATATAAG GAATTTTTAC AAATGAAAAG AGATCGCTTA 
ACCATTGGGT TAATTTTCAT GCTTCCCCTG GTGCAGCTGC TGCTTTTTGG CTATGCTATC
CAAACTGAAG TAAAACATAT ACCCACAGTG GTTTTTGATC AATCCTTATC TCCGGAGAGT
CGTGAACTGC TGGATTCCTT CAAGGTATCA GGTTACTTTG AGGTTACAGA GATGGCGGGA
AGCTATACAG AAGTTACCGA CATGATCGAT AAAGGTACTG TTAAGGTGGG GGTGATTTTC
CCGCCTGATT TTGCTGGGAA TGTGAGAAGG GGAGATACCG CCCAGGTCCA AGTACTAGTA
GATGCCACAG ATAGTATGGT TTCTAATTCT GCCATCGCCA CTGCTAATGC CATTGGACTA
ATTAAATCCC AGAATGTTAT TATTGAAAAG GTTGGTCATT ATCAACCTCC CTACGATGTG
CGAGTTCGGC CTTGGTATAA TCCAGATGGA ATTACGGCCT ATTACATGGT ACCGGCTATT
TTGGGAATCA TTGTAACAAT GACAATGGTA ATGATGACAT CAATGGGGAT TGTTCGTGAG
CGGGAGCGGG GAACTCTGGA GCAGCTTATT GTTACCCCCA TTAAATCCTA TGAATTAATG
ATTGGAAAGG TTATTCCATA CGTTGCCCTG GGTTATCTGC AAATTACGGT AGCATTGCTG
GTGGGAGTGA TTATCTTTGA TGTTCCCATC CGGGGCAGCT TACTGCAACT GTATCTTTTA
ACACTGTTCT TTATTACTGC GTCCTTGGGT ATTGGTGTAC TGATATCTAA CATCGCCAAG
TCACAAATGC AAGCCATGCA AATGTCATTT TTCGTTCTAT TGCCTAGTAT TTTGCTATCG
GGATTTATGT TTCCAAGGGA TGCTATGCCT GTTGTGATAA AATATATAAG TAACCTGATC
CCTCTAACTT ATTATTTAAC CATTATTCGG GGGATTGTCC TGAAGGGGAT AGGATTTTCT
TATCTGGTAC CCCAAGTCAT AGCATTGTTT ACTTTCACAG TAGTATTGAT GACTATTAGT
ATCTTAAAGT TTAAGAAGAA GATTGTCTAA
 
Protein sequence
MSRILSILYK EFLQMKRDRL TIGLIFMLPL VQLLLFGYAI QTEVKHIPTV VFDQSLSPES 
RELLDSFKVS GYFEVTEMAG SYTEVTDMID KGTVKVGVIF PPDFAGNVRR GDTAQVQVLV
DATDSMVSNS AIATANAIGL IKSQNVIIEK VGHYQPPYDV RVRPWYNPDG ITAYYMVPAI
LGIIVTMTMV MMTSMGIVRE RERGTLEQLI VTPIKSYELM IGKVIPYVAL GYLQITVALL
VGVIIFDVPI RGSLLQLYLL TLFFITASLG IGVLISNIAK SQMQAMQMSF FVLLPSILLS
GFMFPRDAMP VVIKYISNLI PLTYYLTIIR GIVLKGIGFS YLVPQVIALF TFTVVLMTIS
ILKFKKKIV