Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1588 |
Symbol | |
ID | 4955721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1728730 |
End bp | 1729653 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640180762 |
Product | ABC transporter related |
Protein accession | YP_001112941 |
Protein GI | 134299445 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.187855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTATG TGGTAGAGAC CAATGATTTA ACCAGAACCT TTGGCAGTTT TACCGCCGTG AATAAGCTGA CTATTAAAAT TCGTCCCGGC GAAATATATG GTTTTTTGGG TCCGAACGGT TCCGGTAAAT CCACAACCAT ACGGATGCTC TGTGGTATTC TAGAACCTAC CTCCGGCAGC GGCAGGGTGC TGGGCTACGA TTTAGCCAGC GAGTCTGAGC AAATTAAAAG TCGCATTGGT TACATGTCGC AAAAATTTAG TCTTTATGAT GACTTAACAG TACAGGAAAA CCTTAGTTTT TATGCAGGGC TTTACAGTGT GCCACGGCCG GAGCGGAAAA CGCGAATTGA AGAAATGATA GAGATGGCCT GTCTTACCGG GCGTGAAAAG GAACTGGTAG TCAATCTTAG TCTGGGTTGG AAGCAACGAT TGGCACTGGG CTGCGCCATC CTTTCCAAAC CCGCCATCAT ATTTTTGGAT GAACCAACCA GCGGCATAAG TCCCACTAGC CGTAAAATGT TTTTTAATAT TATACAAGGA TTGGCTAATG CAGGAACCAC AATCATGGTT ACCACCCACT TCATGGATGA GGCTGAACGC TGTAGCAATA TTGCCTTTAT TTCCGAGGGC CATTTAATTG CCAATGATAC ACCGGACAAC CTGAGAAACA ATGTGCTGGA GGGTGTGTTG GCAGAGGTGG CTACTAATAA TCCCATGGAC AGACTACCTG TGGTTGAAGC CCTACCATAT GTTAAGGAAT GTTCTGTCCA TGGTTCTCTA TTACATGTGC TGGTGCAGTC TGAAGAGAAT CTGTCGGAGC TTCAACAACA CACAGCTGGT AACATAAAGA AAATAACACC CTCCCTGGAG GATGTATTTA TTGCTTTGTC CAGGCAGAGA AGGAGGGGTA GTGCCAATGA GTAG
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Protein sequence | MDYVVETNDL TRTFGSFTAV NKLTIKIRPG EIYGFLGPNG SGKSTTIRML CGILEPTSGS GRVLGYDLAS ESEQIKSRIG YMSQKFSLYD DLTVQENLSF YAGLYSVPRP ERKTRIEEMI EMACLTGREK ELVVNLSLGW KQRLALGCAI LSKPAIIFLD EPTSGISPTS RKMFFNIIQG LANAGTTIMV TTHFMDEAER CSNIAFISEG HLIANDTPDN LRNNVLEGVL AEVATNNPMD RLPVVEALPY VKECSVHGSL LHVLVQSEEN LSELQQHTAG NIKKITPSLE DVFIALSRQR RRGSANE
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