Gene Dred_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1558 
Symbol 
ID4958094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1695709 
End bp1696251 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content40% 
IMG OID640180731 
Productcupin 2 domain-containing protein 
Protein accessionYP_001112911 
Protein GI134299415 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA TATTTGAAAA AGTACGAACT TTGAGAAATC AAAAAAATAT GACATTAAAA 
GACCTCAGTG AGAAAACTGG CTTGTCTGTA AGCTTTTTGT CACAGGTGGA GAGGGGGACG
TCTTCACTGG CCATTACTTC CTTAAAAAAG ATCGCTGATG CATTAAATGT TCACATTGCG
TCGTTTTTTG CTAATTATTC AAACACGAAC TTTACTACAA GGGCGGACGA ACAGAAATCT
TTTAAAATTG AAGGTTCAAG TACAGAGTAC ATAAGACTGA GTGGGGAATT CCATGGCCGA
AACCTGGAAC CATTGTTAGT CACCTTTGCA CCTGGTCAGG TTCAGCCCAA CACCTTTTGT
CACCCTGGAG AAGAATTTTA CTATGTCTTA GAGGGAGCGG TTATTTTCAA TGTGGATGGC
AAAGAAATCC TGGTAAAGGA AGGGGATACT ATTCATTTTC CTTCAACCTT ACCTCACTTT
TGGATTAACC CCCTGCAACA AAAGACAAAG GTTCTATGTG TGTTAACACC GGTGATCTTC
TAA
 
Protein sequence
MEEIFEKVRT LRNQKNMTLK DLSEKTGLSV SFLSQVERGT SSLAITSLKK IADALNVHIA 
SFFANYSNTN FTTRADEQKS FKIEGSSTEY IRLSGEFHGR NLEPLLVTFA PGQVQPNTFC
HPGEEFYYVL EGAVIFNVDG KEILVKEGDT IHFPSTLPHF WINPLQQKTK VLCVLTPVIF