| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1547 |
|---|
| Symbol | |
|---|
| ID | 4957939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1679419 |
|---|
| End bp | 1680966 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640180720 |
|---|
| Product | hydantoinase/oxoprolinase |
|---|
| Protein accession | YP_001112900 |
|---|
| Protein GI | 134299404 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTACA GAATTGGTAT TGACGTTGGC GGCACCAATA CGGATGCCGT AATTTTAGAT
GAAAACTTAA CTCCAGTGGC CAAAACCAAG ACACCCACCA CAGCAGATGT TTCCACTGGT
ATCTATCAGG CCATGTCCAT GGTACTGCAA CAAGGAGTGG TGGATCGCAG CAAGATCAAA
TATGCCATGC TTGGCACAAC CCATTGCACA AATGCTGTGG TAGAACGCAA ACGGTTGAAT
AAAGTGGCAG TCATCCGCCT CGGTTTACCG GCCACCGGTG CCATTAAGCC CTTAACTGGT
TGGGCCAGCG ACCTGAGACA AGCCATTGGC AATCAGCAGT TTCTGGTAAG GGGCGGTCAC
GAATTTGACG GCAGAGAAAT ATCCCCCCTA GATGGAAAAA GGCTGCGGGA AATTGCCCAA
GAAATTAAAG GGAAAGCGAA CTCCATTGCC ATTACCTCGG TTTTTTCACC AGTCACAAAT
AACCATGAAC TGAGGGCGGC GGAAATAATG AAGGAAGAGT TGGGTGACAT TCCGGTATCC
CTTTCCCATG AAATAGGCAG CATTGGTCTT TTGGAGCGGG AAAATGCAAC GGTGTTAAAT
GCTTCTTTGG TTGATGTTGC CCGGACCACT GCGGATGGTT TTGTATCGGC CCTGCAAAGG
GAGGGTATTG ATGCCAGAGT TTACTTTGGG CAAAATGATG GAACTTTAAT GGCTGTGGAA
TATGCCACCC GTTATCCTAT CCTCACCATC GCCTGCGGGC CGACAAACAG TATTCGTGGT
GCTTCCTATT TGGCCAAGCA TAAGAACGCC CTGGTGGTTG ATGTGGGTGG CACCACCACG
GATGTTGGGG TGCTGGTGAA TGGTTTCCCC CGGGAATCAT CCATCGCAGT GGAAATTGGT
GGTGTACGCA CCAATTTCCG TATGCCTGAC CTGATTTCCA TTGGATTAGG CGGCGGCACC
ATTGTTCGAA ATGATCAAGG CATCACCATT GGTCCCGATA GTGTGGGTTA TCGCATTACC
GAGGAAGCTT TGATCTTTGG TGGGCAAGCC CTGACCACCT CGGATGTGGT CACCGCCCTT
GGTCTGGCTT CCATGGGAGA TGCGGCTAAG GTTAAAGACC TGCCCAAGGA TACACTAAAT
GAGGCTTACC GAAAGATGGT GGCCATGACT GAAGATGTCA TTGACCGCAT GAAAACCAGC
TCAGATCCCA TTCCAGTTAT CCTGGTTGGA GGTGGCAGTA TCATCCTGCC CGATCAATTG
GCCGGGGCCT CCGAGGTAAT ACGTCCGGAC CATTACGATG TTGCCAATGC CATTGGCTCC
GCCATTGCCC AGGTAAGTGG GCAGGTGGAA AGGGTTTTCT CCATTGACGA AATGGGTCGG
GAGGGTGCCC TGCAAAGGGC CAAGCAAATG GCGGTAGAAG AAGCCATAAA GGCTGGGGCA
GATCCGGACA GCATTGATAT TGTTGAAATC GAAGATGTCC CGTTGGCTTA TTTGCCGGGC
AATGCTACAA AAATTAGGGT AAAGGCTGCC GGTAATCTGG TGGTATAG
|
|---|
| Protein sequence | MSYRIGIDVG GTNTDAVILD ENLTPVAKTK TPTTADVSTG IYQAMSMVLQ QGVVDRSKIK
YAMLGTTHCT NAVVERKRLN KVAVIRLGLP ATGAIKPLTG WASDLRQAIG NQQFLVRGGH
EFDGREISPL DGKRLREIAQ EIKGKANSIA ITSVFSPVTN NHELRAAEIM KEELGDIPVS
LSHEIGSIGL LERENATVLN ASLVDVARTT ADGFVSALQR EGIDARVYFG QNDGTLMAVE
YATRYPILTI ACGPTNSIRG ASYLAKHKNA LVVDVGGTTT DVGVLVNGFP RESSIAVEIG
GVRTNFRMPD LISIGLGGGT IVRNDQGITI GPDSVGYRIT EEALIFGGQA LTTSDVVTAL
GLASMGDAAK VKDLPKDTLN EAYRKMVAMT EDVIDRMKTS SDPIPVILVG GGSIILPDQL
AGASEVIRPD HYDVANAIGS AIAQVSGQVE RVFSIDEMGR EGALQRAKQM AVEEAIKAGA
DPDSIDIVEI EDVPLAYLPG NATKIRVKAA GNLVV
|
|---|
| |