Gene Dred_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1450 
Symbol 
ID4957014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp1573246 
End bp1573905 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content40% 
IMG OID640180625 
Productdi-trans,poly-cis-decaprenylcistransferase 
Protein accessionYP_001112805 
Protein GI134299309 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.949656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCAA AATTCAAACG TCTCCCAAAG CATATTGGCA TTATTCCGGA CGGCAATAGA 
AGATGGGCTC AAAACCAGGG CCTGGCAAAG GAAGCTGGTT ATGACCATGG CATTACCCCT 
GGGTTTGATC TATATCAAAT ATGTTTGGAA TTAGGTATAC CAGAAATAAC CTTTTATGGT 
TTTACCGTTG ATAATACCAA GCGACCCCCA GTGCAAAAAA AAGCCTTTCA GAAAGCCTGT 
GTGGATGCAG TTAACATATT GGCTAACCGA GATGCCTCAT TGCTGGTGAT TGGCAATCAT 
GAATCTGCTC AGTTTCCAAA GGAATTACTT CCCTATACCA CCCGCAAAAT CTTTGGCAGT 
AATCGGATTA AGATTAACTT TTTGGTAAAT TATGGTTGGA AATGGGATTT GAATCAGGCA 
TTTAACAACA ATTCAATGGA TTCTTCTTAC TTTCACGAAA AAATTGCTTC CAAGGATATT 
TCTAGAATTG ACTTAATCAT ACGCTGGGGT GGACGTAGAA GGTTAAGTGG TTTTCTCCCT 
GTCCAATCCA TTTACGCAGA TTTTTATGTA GTTGAAGACC TTTGGCCAAA TTTTCGTTCT 
GAACAATTCT ACGAAGCTCT TATGTGGTAT CAAGATCAGG ACATTACTCT GGGGGGATGA
 
Protein sequence
MIPKFKRLPK HIGIIPDGNR RWAQNQGLAK EAGYDHGITP GFDLYQICLE LGIPEITFYG 
FTVDNTKRPP VQKKAFQKAC VDAVNILANR DASLLVIGNH ESAQFPKELL PYTTRKIFGS 
NRIKINFLVN YGWKWDLNQA FNNNSMDSSY FHEKIASKDI SRIDLIIRWG GRRRLSGFLP 
VQSIYADFYV VEDLWPNFRS EQFYEALMWY QDQDITLGG