Gene Dred_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1438 
Symbol 
ID4956841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1560054 
End bp1561190 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content41% 
IMG OID640180613 
Productmembrane protein-like protein 
Protein accessionYP_001112793 
Protein GI134299297 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGAT TAAAGGCCCT AAAATTAAAA ATGCCCTTTG GGGCAAGGAT GATTAAGACC 
GCCATTGCAG TGATGTTATC CTTCTATATA GCTCACAAAT ATCAATTAAA TGCCGTGGTG
GCAGTTATAT CAGCCATTAT TAATGTCCAG CCTACTTTAA GTCGTTCTCT TCGAAATGCC
ATTGAACAAA TTATTGTTCA TGTTGTTGGT ATGGTGATAG GTTTAGGTGT AGGCTATCTC
TGGGCCCCCG GGCCTTTGGC CATGGGAGTT GCTACACCGC TGGTTATTTG GTCTGCTTTA
AGATTGGGGT ATGGTGAAGT TGCCATGGCA CTGTTGCCCA TGGTTATTAT ATTAAGTTCA
CCGGAAGAAG CATTTTTGAC GGAAGCCCTT TATAGAAGCA TCGTCATATT TTTAGGTTTG
GGTGTGGGGA TTGCTGTAAA TGGCTTGATA GCGCCACCCC GTTACCGAGA CCGTTTGCTG
ACGCGTTTAC AAGAATTAAA TGATGTCACT GTGGACTTCT TTGGTTCATT GGCCAATGAT
TTTACAGTTC CTAAGTTAAT ACCCTATGAA GAATATGAGA AAAAACGTTT GGAGGTAAAA
AGTTTACTAA AGGAATGTCG CTTGTATCTT GAACTTTGGC GGGAACAATT AGGGCAGAAG
AGAACACCCT TCCCCTGGCA GGATCAATTA ATTGAACAGT ATATAGATTT TAATACCAAC
CTCTATCACA AAAGCAAAGA CATTTTTGAG AATACCCGTG AGCGCATTGC CTGGCGGGAA
CAAATGGGTC AGCCTATCAT TACGCCGGAA TTTGAGGCCA TATTGGCAAT GCTTCAACAT
GGCATAGATG ATTTTCGCCG TTTAAATAAT CAATTAAGAA TGTCTATGTT TAAAGGGGTG
CCTGCCCAAC ATTATCCCGT AGATGATAAA TTCTGGCAAG AAATGAGCGA TTATGTGGAT
CTGTGGCATG AAAAACTAAC CGGAGCCTAT TATATGCATG CACTGCTCTT TTTGGCTGTG
GTGGCAAATA ATTTGAAGTA TGCTAACAGG ACAGTAAAAG AATATCTAAA CATTATTCAC
GAAAATCAGG ATATCGCATC CAGAGAGATC AGAAAAAGAC TGGACTCAGG ACTTTAA
 
Protein sequence
MPRLKALKLK MPFGARMIKT AIAVMLSFYI AHKYQLNAVV AVISAIINVQ PTLSRSLRNA 
IEQIIVHVVG MVIGLGVGYL WAPGPLAMGV ATPLVIWSAL RLGYGEVAMA LLPMVIILSS
PEEAFLTEAL YRSIVIFLGL GVGIAVNGLI APPRYRDRLL TRLQELNDVT VDFFGSLAND
FTVPKLIPYE EYEKKRLEVK SLLKECRLYL ELWREQLGQK RTPFPWQDQL IEQYIDFNTN
LYHKSKDIFE NTRERIAWRE QMGQPIITPE FEAILAMLQH GIDDFRRLNN QLRMSMFKGV
PAQHYPVDDK FWQEMSDYVD LWHEKLTGAY YMHALLFLAV VANNLKYANR TVKEYLNIIH
ENQDIASREI RKRLDSGL