| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1354 |
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| Symbol | |
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| ID | 4958415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1450319 |
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| End bp | 1451788 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640180533 |
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| Product | WD40 domain-containing protein |
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| Protein accession | YP_001112713 |
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| Protein GI | 134299217 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00427264 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAG AACGACATCA TGAGCCGGAT AATAAGGTTC TTCCCTTTGA AAATTATTTA
AAAGTTAAAG AAGAATGGGA AGATGACATT TCCCAATTAC TGACCCATAT GAGGCAGGTA
AGGGAAGCTG TCCCAGTAAA TCGCCGCTTG CAGGTGGAAT TACGGAAGAA ATTACTGAGC
CGACAAAAGG AGATAATGAA CCAGAATGGG ATAGTAACTT CTCCAGAAGA AGCCACAAAA
CGAAAAATCG CACAAACTGG TTTATGGCAG TCAAGATTAG CACCGTTCCT GGGAGTATTG
GCCGCCATTT TTATAGTAAT GTCCTTAACG TGTCTTTGGC GTTATGCCAA TGGGCAATAC
CATTTGGAGG TCACAGGGTC ACCCCAAGAG ATCACTCGCT TTTGGACGGA AGATGCACCC
TTACAACCGG CAGTGAGTCC TGATGGTACA AAGATTTTGG TGGTAAGAGG CGGTAGTTTG
GTGCTCCTAT CCCATACGGG TGTTCAACTG GCTTATCTGG AACCTCCTGA AGGGGCCACT
TTCCAATCAC CCACCTGGTC ACCGAACGGA GAACAAATTT CCTTTGTGTT TAGTCAGCAA
GGGAAAGAAG AGATTAGGCA ACTGGCAGCA GAGAAGATTA TAACTGCGAC AAAGATGAGT
AATGTTTATT CCCAGACAAC GGCACGAGGT GCAGAAAAAA AAGGTCAGGA AGCAAAAGAT
TCTTTGCAAA CCTTTGCTGG AAAAAAGCTA AAAGCAGCAG ACCTAAATCA TAAAAGTATT
CACTTTTCAA ACTTGGTGTA TTCGCCTGAC GGTAATAGAT TGGCCTATGT AATGGGTAGA
ATCGGGGAGC CAACTGAGGT TTGGGTTCGG TATTCTAACG GAGAAGAAAA ACGAATTACC
AATGGTGATG CTCCAACTTG GTCACCCAAT GGGAAGTATT TAGTGGTCCA GCGTCCTGGT
AAATCTAAAA CCTATGATCT CTGGCTGGTT AATGTTGAAA CTGGCGGGGC AGATCTCTTA
GGTCCCGGAG AAAACCCAAC CTGGAGTAAA AATGGCTATC TTGCCTTTAA TACAGTCATT
GTCCAAGAGC GAGTTCTAAC CTTTTTGCCA AATGGAGACC CCCAGTATAC GGTCCGTCAG
CAAGTAGCCG AGGGACGCTC AACCTATCTA GGGGAGGATG GGTCAACTGT TTTGAAACAA
TTAAAAGAAG GGGAAGGCTG GCTGGCCACA AGCCATTTAT TGATAGCACC GGAAAATCGA
ATTTCTGGTG TTGAACTTAG CTGGCTACGC CAACAGGAAC TTAGTGGTAC CCTTGAGCCA
AAGACATTGG TGTTAAACGA AATATCAAAA TGTGAGGGCC AGGTCTTTGG ACCGGATGAT
AAGTGGTTAC TGTATGCCCG CCGTGATGGC GATACCGTTG CCTTGCTTAA ACTGAGGTTA
GGGGAACAAT GGGAGAAGGA GAGGAACTAA
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| Protein sequence | MTEERHHEPD NKVLPFENYL KVKEEWEDDI SQLLTHMRQV REAVPVNRRL QVELRKKLLS
RQKEIMNQNG IVTSPEEATK RKIAQTGLWQ SRLAPFLGVL AAIFIVMSLT CLWRYANGQY
HLEVTGSPQE ITRFWTEDAP LQPAVSPDGT KILVVRGGSL VLLSHTGVQL AYLEPPEGAT
FQSPTWSPNG EQISFVFSQQ GKEEIRQLAA EKIITATKMS NVYSQTTARG AEKKGQEAKD
SLQTFAGKKL KAADLNHKSI HFSNLVYSPD GNRLAYVMGR IGEPTEVWVR YSNGEEKRIT
NGDAPTWSPN GKYLVVQRPG KSKTYDLWLV NVETGGADLL GPGENPTWSK NGYLAFNTVI
VQERVLTFLP NGDPQYTVRQ QVAEGRSTYL GEDGSTVLKQ LKEGEGWLAT SHLLIAPENR
ISGVELSWLR QQELSGTLEP KTLVLNEISK CEGQVFGPDD KWLLYARRDG DTVALLKLRL
GEQWEKERN
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