Gene Dred_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1317 
Symbol 
ID4955460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1409782 
End bp1411050 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content45% 
IMG OID640180496 
Producturacil transporter 
Protein accessionYP_001112676 
Protein GI134299180 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.980977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAC GTGAAATCCA GGTAGAAGAA AGACTCCCCT TACTCCAAAC CTTGCCCCTG 
AGTCTTCAGC ATTTATTTGC AATGTTTGGC GCTACAGTTC TGGTACCCAT CCTGTTCAAG
GTGGACCCTG CAACAATTCT ACTATTTAAC GGTATAGGAA CACTCCTGTA TATTTTTATC
TGCAAAGGTC GTATCCCAGC ATACCTGGGT TCAAGTTTTG CTTTTATATC CCCGGTAATT
GCAGTACTTA GTAAGTATGA TTATAGCGCT GCCCTTGGCG GATTTATCGT AGTAGGCTTG
ATTTTCTCCG CAGTTGCCTT GTTAATTGGG GCTGTGGGCA CAAAATGGAT TGATGTTGTC
TTCCCACCTG CTGCCATGGG TGCTATTGTT GCAGTCATTG GTTTAGAATT GGCACCTGTT
GCTGCCCAGA TGGCCGGCTT GGCTGCTGCT GACCCAACTA AATATGTTGC GGATCCAAAG
GTGATTACCG TATCCATGTT TACTTTGGGC GTAACTATTT TAGGCAATAT TGTGTTCCGA
GGTTTCTTAG CCATTATCCC GATCCTAGTG GGTGTCATCT CTGGTTACGT TCTGTCTATC
TTTATGGGCC TGGTAAGCAC CGAGGCCATT GCACAGGCCA GTTGGTTTGC AGTTCCTACT
TTCTACCGCC CTACCTTTGA TTTAAATGCA ATTATCATTA TTATTCCAGC GGCTCTGGTT
GTTATCGTAG AACATGTTGG CCACCTCTTT GTAACCAGTA ACATTGTCAG TCGTGATTTA
TCAAAGGATC CTGGATTGCA CCGTTCATTA CTGGGCAACG GTATTTCTAC CATGCTTTCC
GGTTTCTTTG GATCCACCCC CAACACCACC TATGGCGAAA ACATTGGGGT TATGGCCCTG
ACCAAGGTTT ACAGTACTTG GGTTATTGGC GGGGCCGCCA TTCTTGCTAT CATTCTTTCT
TTCGTAGGAA AATTATCCGC TGCCATTCAA AGTATACCCA CACCAGTTAT GGGTGGTGTA
TCCCTACTGC TTTTTGGTGT AATCGCTGCA TCTGGTATCC GTATGCTTGT AGAAGCCAAG
GTTGATTATA GTAAAGCATC AAACTTAATA TTAACGTCCA TTGTCATGAT CATCGGAGTT
AGTGGTGCTC AAATTCAATT GGGTGCTGTT AGCCTAAAAG GAATGGGGCT GGCAACGGTG
GTGGCTATGA TTTTAAGTCT CTTCTTCCGC TTGCTGGAAC AAGCCAATAT TAGCAATGAG
AATAAATAA
 
Protein sequence
MEKREIQVEE RLPLLQTLPL SLQHLFAMFG ATVLVPILFK VDPATILLFN GIGTLLYIFI 
CKGRIPAYLG SSFAFISPVI AVLSKYDYSA ALGGFIVVGL IFSAVALLIG AVGTKWIDVV
FPPAAMGAIV AVIGLELAPV AAQMAGLAAA DPTKYVADPK VITVSMFTLG VTILGNIVFR
GFLAIIPILV GVISGYVLSI FMGLVSTEAI AQASWFAVPT FYRPTFDLNA IIIIIPAALV
VIVEHVGHLF VTSNIVSRDL SKDPGLHRSL LGNGISTMLS GFFGSTPNTT YGENIGVMAL
TKVYSTWVIG GAAILAIILS FVGKLSAAIQ SIPTPVMGGV SLLLFGVIAA SGIRMLVEAK
VDYSKASNLI LTSIVMIIGV SGAQIQLGAV SLKGMGLATV VAMILSLFFR LLEQANISNE
NK