Gene Dred_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1316 
Symbol 
ID4955960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1408648 
End bp1409667 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content42% 
IMG OID640180495 
Producthypothetical protein 
Protein accessionYP_001112675 
Protein GI134299179 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.919916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTACATT TGCCGATTGC CAATGCAGAT GTTAATGGAT GGGCCTTGTT ATTTCTGGGC 
TTTTTTGTTG GGGTACTGGG GGGCTTCTTC GGAATTGGCG GGGCTTTTAT CGTAACGCCT
GCCCTTAATA TACTTGGCTT TCCAATGGTC TTTGCCATTG GGACCGATAT TGCCCATATT
TTTGGCAAGT CCATAGTAGC GACATTTAAG CACTTAATGC TAAGACATGT GGACATTAAG
CTTGGTCTAA TTATGGGTCT ACTGGGTATG TATGGTGTTT CCTTAGGAAA AAAATCGGTT
TTATATTTGG AGAAAATTGG TCAAATAGGA CCCATCGTGA GGCTAGTATA CATTGTTCTG
CTCTTTGCAT TAGGTTTTTT TATGATAAAG GAATATCTCT TTTATTCCCG TCTGTCCGAG
CAGCAACAAA TAGAGGCAGA GGCAAAAAGG TCAAAACTTG CTAACTGGAT ACAAAACCTT
AGAATCGGGC CCTTTATAAG TTTTCCCACC TCAAATGTAT ATGGTATTTC CCTCTGGGTT
GTTGTTTTCT TAAGTGTTAC CAGTGGATTT ATATCAGGCT TTCTTGGTGT GGGAGGGGGG
TTTGTTAGAG TTCCTATGCT TATTTATTTT CTTGGTCTTC CTACTGTAAT GGCAGTGGGT
ACGGACTTGC TTGCTATCTT AATTACCAAT TCCTGGGGGG CGTATATCTA TGCCCTGGCA
GGCAAGGTGG AAATTATGGG TGCTATCGTT ATGTTAGTTG GAGCGGCCAT AGGAGCACAA
ATTGGTTCGG TTGCCACTGC CTACATTAAA GGAATGAAAA TAAGGCTTTA CTTTAGCATA
ACTCTAATGC TGGCCGGAAC AGCTGTTATT TTTAAACAGT TGCTGATGCC CACCCTGGCA
GCCTATTTGA TGCTAAGCAC TGCGGCAATA CTCAGCGGTG TTATTATTTT TATGTTGGTT
CAATCGGTAA AGGCCAAGGG AATTAAACAA GATAATATAA ACCAATATCA CAGGATTTAG
 
Protein sequence
MLHLPIANAD VNGWALLFLG FFVGVLGGFF GIGGAFIVTP ALNILGFPMV FAIGTDIAHI 
FGKSIVATFK HLMLRHVDIK LGLIMGLLGM YGVSLGKKSV LYLEKIGQIG PIVRLVYIVL
LFALGFFMIK EYLFYSRLSE QQQIEAEAKR SKLANWIQNL RIGPFISFPT SNVYGISLWV
VVFLSVTSGF ISGFLGVGGG FVRVPMLIYF LGLPTVMAVG TDLLAILITN SWGAYIYALA
GKVEIMGAIV MLVGAAIGAQ IGSVATAYIK GMKIRLYFSI TLMLAGTAVI FKQLLMPTLA
AYLMLSTAAI LSGVIIFMLV QSVKAKGIKQ DNINQYHRI