| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1124 |
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| Symbol | |
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| ID | 4955410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1195138 |
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| End bp | 1197312 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640180294 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001112484 |
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| Protein GI | 134298988 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGA AGTCAAACCT GAACGCACAA ATTGCGAGGG AATTAGCCAT TAGAGAGAGT
CAAGTGGAAC AGACCGCCAA ATTACTGGAT GATGGAAACA CAGTCCCCTT TATAGCACGA
TATCGTAAGG AAATGACCGG CGAACTGGAT GAAGTTCAAA TTAGAAAGGT TTTTGAACGA
TTAACATCCC TGCGCAACCT AGAAAAGAGA AAAGAAGAAG TACTTCATTC TATAGAAGAA
CAGGGGAAAC TTACAGAGGA ACTCAGGGCA AAGATAGTGG CTGCTGAGTC AGTGACAGCG
GTGGAAGATT TATATCAGCC ATATCGCCCC AAAAGGAAAA CAAGGGCCAG CGTGGCCAGG
GAAAGGGGAT TGGAACCGCT GGCCCAATGG TTGTTTATGG CAACTTCCGG GGTACAACCA
TTAGAAGAGG CAACAAAATA CCTGAACCCA GAAATAGGGG TAAATTGTGC TGAGGAAGCA
CTGCAGGGTG CCATGGATAT CATTGCAGAA ACTATTTCGG ATGATCCCGA TACCCGTGGC
TGGCTGAGAG GGTTTACTTA TCAGCGAGGC GAATTAGTAA CAGAGGTAAA GAATCAGGAG
GCGGATCAGC GGGGTGTCTA CCGAATGTAT TATGAACACA GAGAACCCGT TAAAACAGTG
CCACCTCACC GAGTGCTAGC GATTAACCGA GGAGAAAAGG AAGAAATCCT AAAGGTAAAA
ATAGAAGTTT CAGAAGAGAC CGTAATGGAG AACCTAAACC GACGTTGGAT CTCGATGAAA
TCCGGAGTAG GGGAGATACT CCAAGAGGCC ATAAGGGATG GCTACCGAAG ATTGTTGGCC
CCTGCTGTGG AAAGAGATAT TCGTAATCAA TTAACGGAGT CGGCAGAGGA ACAGGCTATT
TCTGTATTCT CTAAAAACTT AAAGCAGCTA TTATTGCAAC CTCCTGTGAA AGATAAGATT
GTGTTGGGGT TGGATCCTGC TTATCGTACA GGCTGCAAAT GGGCGGTGGT TGATAACACA
GGCAAATTAT TGGAAGTGGG CGTCATCTAC CCGACGCCTC CTCAGAAAAA AATTCAGGAG
GCCAGGGCTG AAATAAGCCG GTTGGTGGAC AAGTATGAAA TCGACATCAT TGCCATTGGT
AATGGTACAG CATCCAGAGA AACCGAGCAG TTTGTAGCTG AGTTGATACA AGACAAAGGC
TGGCAAAAGT TGCAATATAT CATTGTGAAT GAAGCAGGAG CCAGTGTCTA CTCTGCATCA
GAGTTAGCTG CCAAGGAATT CCCAGGGCTG GATGTTGCCC AACGCAGTGC CGTATCTATT
GGACGCAGAC TTCAGGACCC GCTGGCTGAG TTGGTAAAGA TTGAGCCCAG ATCCATTGGA
GTGGGCCAAT ATCAACATGA TGTAGCTCCC AAGCGCTTAG AAGAAAGCCT AAAGGGTGTT
GTTGAGTCAG CAGTAAATAT GGTAGGGGTT GATCTCAACA CCGCTTCAGC TTCACTTTTA
TCCTATGTGT CTGGCATTAA TTCAACAGTG GCCAATAATA TTGTGCATTA CCGTGAAGAA
AATGGAAAAT TTATTGAAAG GACTCAGTTG AAGAAAGTTC CTCGCTTGGG ACCCAAGGCC
TTTGAACAAA GCGTAGGTTT CCTTCGTATT ATGGACGGCA GCAATGCCCT TGATAAAACT
GGGATTCACA CGGAATCCTA TCCAGTGGTA AAGAAGTTGT TAAAAGAAAT TAGCAGTTCC
GAAAGGGATA TTGGCAGTTC TGAACTGAAA GAAAAGCTTA AACAACTGGA CATGGAGAAA
ACAGCAGAAC GATTGGAAAC CGGTGTGCCC ACCCTAAGGG ATATTATTGA CGGGCTGCTG
CGTCCTGGGA GAGACCCTCG GGAAGATCTG CCGGGTCCCC TTTTCCGCAG TAATATTCTA
AAGATTGAAG ATCTGCAGGC AGGTATGGAA CTTAAAGGTA CTGTAAGAAA TGTAGTGGAT
TTTGGAGTTT TTGTGGATGT TGGTCTAAAG AATGACGGTT TGGTGCATCG CAGTGAAATG
ACAGATCGCC GTTTTCGTCA TCCCTTGGAT ATCGTTTCCG TAGGGGATGT AATCAATGTA
TGGGTTCTCG CGGTGGATAT TGAACGGGGA AGGGTTTCCT TAACTATGAA AGAAAGATTG
CCACAAAATC CTTAA
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| Protein sequence | MQKKSNLNAQ IARELAIRES QVEQTAKLLD DGNTVPFIAR YRKEMTGELD EVQIRKVFER
LTSLRNLEKR KEEVLHSIEE QGKLTEELRA KIVAAESVTA VEDLYQPYRP KRKTRASVAR
ERGLEPLAQW LFMATSGVQP LEEATKYLNP EIGVNCAEEA LQGAMDIIAE TISDDPDTRG
WLRGFTYQRG ELVTEVKNQE ADQRGVYRMY YEHREPVKTV PPHRVLAINR GEKEEILKVK
IEVSEETVME NLNRRWISMK SGVGEILQEA IRDGYRRLLA PAVERDIRNQ LTESAEEQAI
SVFSKNLKQL LLQPPVKDKI VLGLDPAYRT GCKWAVVDNT GKLLEVGVIY PTPPQKKIQE
ARAEISRLVD KYEIDIIAIG NGTASRETEQ FVAELIQDKG WQKLQYIIVN EAGASVYSAS
ELAAKEFPGL DVAQRSAVSI GRRLQDPLAE LVKIEPRSIG VGQYQHDVAP KRLEESLKGV
VESAVNMVGV DLNTASASLL SYVSGINSTV ANNIVHYREE NGKFIERTQL KKVPRLGPKA
FEQSVGFLRI MDGSNALDKT GIHTESYPVV KKLLKEISSS ERDIGSSELK EKLKQLDMEK
TAERLETGVP TLRDIIDGLL RPGRDPREDL PGPLFRSNIL KIEDLQAGME LKGTVRNVVD
FGVFVDVGLK NDGLVHRSEM TDRRFRHPLD IVSVGDVINV WVLAVDIERG RVSLTMKERL
PQNP
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