Gene Dred_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1122 
Symbol 
ID4955873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1192852 
End bp1193952 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content42% 
IMG OID640180292 
Producthypothetical protein 
Protein accessionYP_001112482 
Protein GI134298986 
COG category[S] Function unknown 
COG ID[COG3581] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTAA CCTTCCCGCA CATGGGATAC ATGTACATAT CCCTTAAAGG AATGTTAGAA 
TATCTGGGCA TTGAGGTGGT GCCGCCACCT CCCTGTAGTA AAAGAACTTT GAACCTAGGA
GTGAAACATT GTCCTGAGTT TGCCTGTTTA CCTTTAAAAC TAAATGTGGG GAATTTTATT
GAGGCAAGGG AAATTGGGGC AGACACTATT ATGATGGCAG GCGGATGCGG GCCTTGTCGT
TTTGGTTATT ATGCCTATGT TGAAAATGAG ATTTTAAAAG ATTTACAAGT ACATTTTAAT
TTAGTGGTGT TGGAACCACC GGAAAAACAT ATTGGGGAAC TGTTGGGTCG CATTAAAAAA
ATTACCGGCA ATCAACCATG GGTTAAGGTG ATAAAAGCAT TAAGATTTGG TTATCTCAAG
GCAAGGGCTG TGGATCAGGT AGAAAAGAGT TCTTTCCAAA AACGTCCCAG AGAGTTGATA
AGGGGTGCAA CAGACAGAGC CCTCAAACAA GCCATCCATG AAATAGACAG CGCCCAGACC
CCCCAGGAGT TAACCACTGC TGAGGAGAAA TCCCGAGAAA TCATGGAAAG TATATCTATA
GATATCAATC GCCCGGTTTT GAAAGTGGCC CTAATAGGAG AAATATACAC GTTATTAGAA
CCCTTTGCCA ATGGTAATAT AGAGCGACAT TTGGGTAACT TAGGGGTTGA AGTGGATAGG
TCGATGATGT TAAGTGAGTG GATCAATGAT CACTTATTTA TGGGTTTGAT TAGAAATGCG
CCCAGTAGCA AACGATTTAT TAAAGTGGCT TCTCCGTATT TGAATCATTT TGTGGGTGGA
CACGGACAGG AAACCATTGG GGCTGCTGTA TGGTATGGGC AGCAGGGTTT TGATGGCGCT
TTACAGATTT TACCTTTTAC ATGTATGCCA GAAATTGTGG CACAAAGTAT TTTACCAAGC
GTCAGTGGGG ACACCGGTTT ACCAGTGATG ACGTTAATCA TGGACGAACA CAGTGGTGAA
GCCGGCATGG TTACAAGATT AGAAGCATTT GTTGACTTAT TGCAAAGACG AAATGAACAG
AAGGAGGCAT TAACATCCTA G
 
Protein sequence
MKVTFPHMGY MYISLKGMLE YLGIEVVPPP PCSKRTLNLG VKHCPEFACL PLKLNVGNFI 
EAREIGADTI MMAGGCGPCR FGYYAYVENE ILKDLQVHFN LVVLEPPEKH IGELLGRIKK
ITGNQPWVKV IKALRFGYLK ARAVDQVEKS SFQKRPRELI RGATDRALKQ AIHEIDSAQT
PQELTTAEEK SREIMESISI DINRPVLKVA LIGEIYTLLE PFANGNIERH LGNLGVEVDR
SMMLSEWIND HLFMGLIRNA PSSKRFIKVA SPYLNHFVGG HGQETIGAAV WYGQQGFDGA
LQILPFTCMP EIVAQSILPS VSGDTGLPVM TLIMDEHSGE AGMVTRLEAF VDLLQRRNEQ
KEALTS