Gene Dred_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1121 
Symbol 
ID4955350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1191872 
End bp1192855 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content40% 
IMG OID640180291 
Producthypothetical protein 
Protein accessionYP_001112481 
Protein GI134298985 
COG category[S] Function unknown 
COG ID[COG3580] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCTG TTCGGGTGGG TATACCTAGG GCTTTGTTTT ATTATTATTA CTTTCCCCTG 
TGGAAAGAAT TTTTGGAACA ACTGGGTGCG GAAGTGGTTG TTTCTGACCG TACAACTAAA
GAAATTCTGA CAAGAGGGCT AGAGCATTGT GTGGATGAAG CCTGCTTACC AATAAAATTA
GCCTTTGGTC ATGTGCAAAA CCTTGCCGAT AAAGGAGTAG ATATAATATT TCTACCTAGA
ATAGTGAGTG TAGCAAAACA GGAATATATT TGTCCAAAGT TTCTAGGATT TCCAGACATG
GTGCGACAAA ATATCAAAAA TCTGCCCATG ATCATGGATA CTAACATTAA TTTGAGGAAG
AGGAAAAGTG ATGCTGGTAT TTTTGCTCGA GAAGTTGGAA CAGCTATTGG AAAAGGGTCC
GTTAAATCTA GGCTGGCATT TTGGCAGGGC CAATATAAAC ACAAAGGATA TCTAAGATTG
CTGGAACAAG GTTTGCTACC TGATGAAGCC ATATCCGTAT TGGATGGAAA AGAACGCAAG
GACAAAGTCT CTGACACAGA CCTAACAGTG GCTGTTATCG GTCATCCCTA CAACATTTAC
GATCCTTTTA TCAGTATGAA TATAATAAAC AGATTAAAAA ATTTAGGGGT TCAAGTGTTA
ACTGCAGATA ACCTAACGGA ACAAATGATT AATCAGGGTG TTAAACAACT TCCCAAAAAG
TTATTCTGGA CACTTTCAAG AAGAGTGACC GGTGGGGCTT TATATTATCA TGAAAAGGGA
ATGGTGGATG GTATAATCCA TGTGGCTGCC TTTGCCTGTG GGCCAGATTC AATGACAGGT
GAATTAATTG AACGATTTAT TCGGAGAGAA GGAAAAATGC CATTCATGAA CATTAATTTA
GATGAACATA CAGGAGAAGC GGGAATCGTT ACCAGGGTAG AAGCTTTCTT AGACATGATG
CGGTGGCGGA GGGCGATTGT ATGA
 
Protein sequence
MMPVRVGIPR ALFYYYYFPL WKEFLEQLGA EVVVSDRTTK EILTRGLEHC VDEACLPIKL 
AFGHVQNLAD KGVDIIFLPR IVSVAKQEYI CPKFLGFPDM VRQNIKNLPM IMDTNINLRK
RKSDAGIFAR EVGTAIGKGS VKSRLAFWQG QYKHKGYLRL LEQGLLPDEA ISVLDGKERK
DKVSDTDLTV AVIGHPYNIY DPFISMNIIN RLKNLGVQVL TADNLTEQMI NQGVKQLPKK
LFWTLSRRVT GGALYYHEKG MVDGIIHVAA FACGPDSMTG ELIERFIRRE GKMPFMNINL
DEHTGEAGIV TRVEAFLDMM RWRRAIV