| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1114 |
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| Symbol | |
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| ID | 4957434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1182801 |
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| End bp | 1185236 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640180284 |
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| Product | formate dehydrogenase |
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| Protein accession | YP_001112474 |
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| Protein GI | 134298978 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAACC ACTTTGTGGA CTATAAAAAT AGTGATGTTT TCTTAATGAT CGGTTCCAAC
TCAGCAGAAA CCCACCCGCA GGCCATGCGG TGGATTTTGA AGGCTAGAGA TACCAGAGGT
GCCAAGTTAA TAGTTGCTGA TCCAAGACTT ACCAAGTCAG CCAGCATGGC AGACCTTTTT
GTGCGACACC GTCCAGGTAC CGATATTGCT TTTATTAACG GAATCATGAA ATACGTTATT
GAGAATGAAC TGTATCATAA GGAATATGTT ATTAGCTATA CGAATGCTAG TTATTTAATT
AACCCAGATT TTAAATTTAA AGATGGTGTG TTCTCCGGGT TTAACATGAA GGATGGTAAG
GCCAGCTATG ATACCACCTC TTGGCAATAT CAGAAAGAAG GAGAAGACAT TAAAAAAGAT
CCTACTTTGC AAGATCCCCA TTGTGTCTTC CAAATACTAA AGAGACATGT AAGTCGTTAC
GATATCAAAA CTGTTTCACG TATCACAGGG GTACCAGAAG ATCAGTTTAA AAAGGTATGT
GAAATATACA GTACTACCGG TAAGCCTGGT AAAGCTGGTA ATGTTATCTA TGCCATGGGA
ATAACCCAGC ATACACATGG TTCTCAGAAT GCTCGCGCCC TTTGTGTTCT GCAACTTTTA
TTGGGTAACA TTGGGATACC AGGCGGTGGC GTAAATGCCC AGCGTGGGGA ATCCAATGTT
CAGGGTTCCA CGGACATGGC GATGCTCAAT CACCTGTTGC CGGGTTATAT TGGGATGATT
TATGCCGGTA AACATAATAC TTTAAAAGAC TATTTAGAGA AGGAAGTACC TAAAACTGGT
TATTGGTCTA ATAAGGGAAA ATTCCTTGTT AGCTTATTAA AGGCTTGGTA TGGCGGTAAA
GCAACCAAAG AAAATGATTT TGGTTATGAT TTTGTACCCA AACATGATGG TAAAAATCGT
ACCCATATGG GTATATTTGA TGAATTATCC AAGGGTACCG TTAAGGGAAT GTTTGCCTGG
GGGCAGAATC CTGCTGTGGG TGGGCCTTCA GCTTATCAAG AACGTAAGGC CATGGAAAAA
TTAGATTGGC TGGTAGCGGT TGATTTGTTT GAAACCGAAA CTGCAGCCTT TTGGCATCGT
CCCGAGGCAG ATCCCACAAA GATTAATACA GAGGTATTCT TTTTGCCGGC AGCCATGTCC
TATGAAAAAG AAGGAACGGT TGTCAACAGT GGTCGTTGGG CTCAGTTCCG CTACAAGGCA
GTTAACCCGC CGGGTGAGGC CAAGAGCGAT CTGTGGATTG CCGATAAACT GTTTAAGGCA
GTGAAGAAGG AATACCAGAG TGGTGGTAAA TTCCCCGATG CTATTATGAA TATGGTATGG
AACTATGATC AACCCGGCCA CGATGAGCCT AATATAGATA AGATTAATGT TGAAATTAAT
GGTTATGAAG TAGGTAGTGG TAAGACTTTG CCTAGTTTCG CCAAGTTGCA AGATGACGGC
TCAACAGCCT GTGGTAACTG GGTATATGCT GGGTTCTGGT TTGAGGACAA AGATGCTAAG
GTTCCAGCTG CTAAGAGACG CATCAAAAAG GATCCTACTG GTTTAGGGCT TTATCCCCAG
TTTGCCTTCT CATGGCCTGC CAACCGTCGT ATTGTGTATA ACCGCTGTTC TATGGATGCT
AAAGGGAATC CTTGGCATGC AGAGAAGACG ATTATTAAAT GGGATGCGTT GGCCAGTAAG
TGGGTGACCT ATGATGTACC GGACTTTGGT ATTACTAAGC CCGGGGCAGA CCCCCTAGGT
TTGCCAGAAG TCATACCTCC GGAAAAATCT GCAGCAAACC CCTTCATTAT GTTAGATGAA
GGACATGGTC GTCTCTTTGC CGTAAAAGGT GTGATAGATG CACCTATGCC GGAGCATTAT
GAACCAGTGG AAAGTCCCGT TAGAAATATC ATGTCTAAAC AACAGAACAA TCCAATCTTT
GTTAAGTTTA AGGGTGACTT TGAGAAAGTT GCAGGTGCTG CCAATGATAA GTACCCAATT
ATTGCAACCA CCCATCGGGT TGTTGAACAC TACCAGAGTG GTGCGGTAAC TCGGAACTGT
CCTACCCTAG CAGAAGCATC TGCCCATATG TTTGTAAATA TATCACCTAA GTTAGCCCAG
AAATTGGGTG TAAAGATGGG TGATGATGTG ATTGTTGAGA CGCCAAGGGC CCAAATTACT
TGTAAAGCAG CTGTGAACCC GGTTTGCCTG CCTTTACGGG TAGACGGTAA AGAATTAGAA
GTAGTTGGTA TGCCCTGGTG CTTTGGTTAC CAAGGTGTTA CCTCCGGTGC TACAGCCAAT
GATTTAACCC CCAGTGTTGG AGATCCCAAT ACCAGTATTC CGGAATACAA GGCTTTTGTA
GTTAATATTA AAAAAGCCGG CAGGGGGGTG TTTTAA
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| Protein sequence | MTNHFVDYKN SDVFLMIGSN SAETHPQAMR WILKARDTRG AKLIVADPRL TKSASMADLF
VRHRPGTDIA FINGIMKYVI ENELYHKEYV ISYTNASYLI NPDFKFKDGV FSGFNMKDGK
ASYDTTSWQY QKEGEDIKKD PTLQDPHCVF QILKRHVSRY DIKTVSRITG VPEDQFKKVC
EIYSTTGKPG KAGNVIYAMG ITQHTHGSQN ARALCVLQLL LGNIGIPGGG VNAQRGESNV
QGSTDMAMLN HLLPGYIGMI YAGKHNTLKD YLEKEVPKTG YWSNKGKFLV SLLKAWYGGK
ATKENDFGYD FVPKHDGKNR THMGIFDELS KGTVKGMFAW GQNPAVGGPS AYQERKAMEK
LDWLVAVDLF ETETAAFWHR PEADPTKINT EVFFLPAAMS YEKEGTVVNS GRWAQFRYKA
VNPPGEAKSD LWIADKLFKA VKKEYQSGGK FPDAIMNMVW NYDQPGHDEP NIDKINVEIN
GYEVGSGKTL PSFAKLQDDG STACGNWVYA GFWFEDKDAK VPAAKRRIKK DPTGLGLYPQ
FAFSWPANRR IVYNRCSMDA KGNPWHAEKT IIKWDALASK WVTYDVPDFG ITKPGADPLG
LPEVIPPEKS AANPFIMLDE GHGRLFAVKG VIDAPMPEHY EPVESPVRNI MSKQQNNPIF
VKFKGDFEKV AGAANDKYPI IATTHRVVEH YQSGAVTRNC PTLAEASAHM FVNISPKLAQ
KLGVKMGDDV IVETPRAQIT CKAAVNPVCL PLRVDGKELE VVGMPWCFGY QGVTSGATAN
DLTPSVGDPN TSIPEYKAFV VNIKKAGRGV F
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